Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_M07
(242 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein. 54 6e-08
L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein. 54 6e-08
CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein. 54 6e-08
BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein. 54 6e-08
BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein. 54 6e-08
BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein. 54 6e-08
AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein. 54 6e-08
AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant prot... 54 6e-08
BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein. 47 1e-05
U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associat... 31 0.90
BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein. 31 0.90
BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein. 31 0.90
AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein. 31 0.90
AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen r... 31 0.90
AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associa... 31 0.90
BC045643-1|AAH45643.1| 1065|Homo sapiens hypothetical protein LO... 29 2.1
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 29 2.7
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 29 2.7
X98248-1|CAA66904.2| 831|Homo sapiens sortilin protein. 28 4.8
BC023542-1|AAH23542.1| 831|Homo sapiens sortilin 1 protein. 28 4.8
AL390252-11|CAI13180.1| 831|Homo sapiens sortilin 1 protein. 28 4.8
L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein. 28 6.3
BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1 (dystrop... 28 6.3
BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1 (dystrop... 28 6.3
BC117269-1|AAI17270.1| 750|Homo sapiens CCDC142 protein protein. 27 8.4
AY358179-1|AAQ88546.1| 108|Homo sapiens GSQS6193 protein. 27 8.4
AK075543-1|BAC11686.1| 743|Homo sapiens protein ( Homo sapiens ... 27 8.4
>S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant
protein.
Length = 272
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I NSALYNVD GHRAVIFDRF GV+++V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIV 49
>BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein.
Length = 156
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +1
Query: 91 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLV 237
MAA++F I SAL NVD GHRA IFD+F GV+N+V
Sbjct: 1 MAAKVFESIGKFGLALAVAGGMVTSALCNVDAGHRAAIFDQFRGVQNIV 49
>U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associated
protein protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 166 ALYNVDGGHRAVIFDRFAGVK 228
+++ V+GGHRA+ F+R GV+
Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQ 59
>BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 166 ALYNVDGGHRAVIFDRFAGVK 228
+++ V+GGHRA+ F+R GV+
Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQ 59
>BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 166 ALYNVDGGHRAVIFDRFAGVK 228
+++ V+GGHRA+ F+R GV+
Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQ 59
>AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 166 ALYNVDGGHRAVIFDRFAGVK 228
+++ V+GGHRA+ F+R GV+
Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQ 59
>AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen
receptor activity protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 166 ALYNVDGGHRAVIFDRFAGVK 228
+++ V+GGHRA+ F+R GV+
Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQ 59
>AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associated
protein BAP37 protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 166 ALYNVDGGHRAVIFDRFAGVK 228
+++ V+GGHRA+ F+R GV+
Sbjct: 39 SVFTVEGGHRAIFFNRIGGVQ 59
>BC045643-1|AAH45643.1| 1065|Homo sapiens hypothetical protein
LOC138724 protein.
Length = 1065
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 122 WPMRLNNCAAIFFGVLRFLQRNN 54
+P++L+ C+++FF L FL R+N
Sbjct: 204 YPLKLSVCSSVFFNKLAFLPRSN 226
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 SGTGYGS-SWWSC*FCTLQC*WWSQ-SSNL**ICWCKEFGF 239
SGT S SWWS + C WWS +S+ CW F
Sbjct: 33 SGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSF 73
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 123 SGTGYGS-SWWSC*FCTLQC*WWSQ-SSNL**ICWCKEFGF 239
SGT S SWWS + C WWS +S+ CW F
Sbjct: 33 SGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSF 73
>X98248-1|CAA66904.2| 831|Homo sapiens sortilin protein.
Length = 831
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 188 PPSTL*SAELTTPPTRAIPSPTW 120
PPSTL L PP A P P W
Sbjct: 28 PPSTLSQDRLDAPPPPAAPLPRW 50
>BC023542-1|AAH23542.1| 831|Homo sapiens sortilin 1 protein.
Length = 831
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 188 PPSTL*SAELTTPPTRAIPSPTW 120
PPSTL L PP A P P W
Sbjct: 28 PPSTLSQDRLDAPPPPAAPLPRW 50
>AL390252-11|CAI13180.1| 831|Homo sapiens sortilin 1 protein.
Length = 831
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 188 PPSTL*SAELTTPPTRAIPSPTW 120
PPSTL L PP A P P W
Sbjct: 28 PPSTLSQDRLDAPPPPAAPLPRW 50
>L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein.
Length = 895
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 218 ANLSKITAL*PPSTL*SAELTTPPTRAIPSPTWP 117
A + +TA+ PP+T + PP+R +P+PT P
Sbjct: 316 ATPTPVTAIGPPTTA----IQEPPSRIVPTPTSP 345
>BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 218 ANLSKITAL*PPSTL*SAELTTPPTRAIPSPTWP 117
A + +TA+ PP+T + PP+R +P+PT P
Sbjct: 316 ATPTPVTAIGPPTTA----IQEPPSRIVPTPTSP 345
>BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 218 ANLSKITAL*PPSTL*SAELTTPPTRAIPSPTWP 117
A + +TA+ PP+T + PP+R +P+PT P
Sbjct: 316 ATPTPVTAIGPPTTA----IQEPPSRIVPTPTSP 345
>BC117269-1|AAI17270.1| 750|Homo sapiens CCDC142 protein protein.
Length = 750
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 117 WPSGTGYGSSWW 152
WPSGT G+ WW
Sbjct: 46 WPSGTSGGTPWW 57
>AY358179-1|AAQ88546.1| 108|Homo sapiens GSQS6193 protein.
Length = 108
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 117 WPSGTGYGSSWWS 155
WP G+G SSWWS
Sbjct: 57 WPLGSGPPSSWWS 69
>AK075543-1|BAC11686.1| 743|Homo sapiens protein ( Homo sapiens
cDNA PSEC0243 fis, clone NT2RP3000326. ).
Length = 743
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 117 WPSGTGYGSSWW 152
WPSGT G+ WW
Sbjct: 46 WPSGTSGGTPWW 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.131 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,501,356
Number of Sequences: 237096
Number of extensions: 712215
Number of successful extensions: 1520
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1388364868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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