Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_M07
(242 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 0.31
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 0.31
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 0.31
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 0.31
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 0.31
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 24 0.31
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 0.31
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 24 0.31
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 23 0.41
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 0.71
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 0.94
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 0.94
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 20 3.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 19 6.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 19 8.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 19 8.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 19 8.8
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 429 AMVVDRLCLIVFTLFTVLAT 448
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 429 AMVVDRLCLIVFTLFTVLAT 448
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 429 AMVVDRLCLIVFTLFTVLAT 448
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 429 AMVVDRLCLIVFTLFTVLAT 448
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 429 AMVVDRLCLIVFTLFTVLAT 448
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 429 AMVVDRLCLIVFTLFTVLAT 448
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 497 AMVVDRLCLIVFTLFTVLAT 516
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 0.31
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A V++LC +F FT+LAT
Sbjct: 497 AMVVDRLCLIVFTLFTVLAT 516
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.4 bits (48), Expect = 0.41
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -2
Query: 142 EPY--PVPLGQCG*TT--VLPSFSEFYDSCNVIIILNVKYGFYYFPS 14
EPY PV + CG +L + F+D + +K G Y +PS
Sbjct: 87 EPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYDYPS 133
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 0.71
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 120 ANAVEQLCCHLFRSFTILAT 61
A ++++C +F FTI+AT
Sbjct: 523 AMVIDRMCLIIFTLFTIIAT 542
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 0.94
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 174 VECRINNSTN*SHTQSHLANAVEQ 103
VEC++ N + SH+ NA +
Sbjct: 217 VECKMEQQGNYENAVSHICNATNK 240
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 0.94
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 174 VECRINNSTN*SHTQSHLANAVEQ 103
VEC++ N + SH+ NA +
Sbjct: 217 VECKMEQQGNYENAVSHICNATNK 240
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.2 bits (40), Expect = 3.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 108 QPHWPSGTGYGSSWWSC*FCTL 173
Q HWP +SW S TL
Sbjct: 461 QQHWPMEEEPAASWGSASDVTL 482
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 19.4 bits (38), Expect = 6.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 141 SHTQSHLANAVEQLCCH 91
SH SHL++A+ + CH
Sbjct: 285 SH-HSHLSSALGRSACH 300
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 19.0 bits (37), Expect = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 138 GSSWWSC*F 164
GSS WSC F
Sbjct: 372 GSSIWSCLF 380
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 19.0 bits (37), Expect = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 138 GSSWWSC*F 164
GSS WSC F
Sbjct: 425 GSSIWSCLF 433
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 19.0 bits (37), Expect = 8.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 224 TPANLSKITAL*PPSTL*SAELTTPP 147
T + T P+T +A TTPP
Sbjct: 665 TTTTTTTTTTTTTPNTTQNASATTPP 690
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.131 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,228
Number of Sequences: 438
Number of extensions: 1376
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4149981
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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