Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M06
         (415 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54JW6 Cluster: Putative uncharacterized protein; n=1; ...    33   1.8  
UniRef50_Q5FJW9 Cluster: ATP-dependent exonuclease subunit B; n=...    32   4.0  
UniRef50_Q7QJP7 Cluster: ENSANGP00000009345; n=1; Anopheles gamb...    32   5.3  

>UniRef50_Q54JW6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 532

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -1

Query: 394 YNY*HDLPNNFIITSTYDDKKL 329
           YNY +DLP  + ITSTYDD ++
Sbjct: 120 YNYLNDLPTEYNITSTYDDDEI 141


>UniRef50_Q5FJW9 Cluster: ATP-dependent exonuclease subunit B; n=3;
           Lactobacillus|Rep: ATP-dependent exonuclease subunit B -
           Lactobacillus acidophilus
          Length = 1160

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -2

Query: 249 PFTELSAKCLRH*DSKTAARFFLNLRKLALKFPYVKLS 136
           PF E   KCL H  SK A  +  NL K  L+  Y +LS
Sbjct: 859 PFNEYLFKCLDHTTSKVAHNWCKNLNKTPLRAKYSELS 896


>UniRef50_Q7QJP7 Cluster: ENSANGP00000009345; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000009345 - Anopheles gambiae
           str. PEST
          Length = 329

 Score = 31.9 bits (69), Expect = 5.3
 Identities = 26/77 (33%), Positives = 39/77 (50%)
 Frame = +1

Query: 127 HLW*KFNVRKFQRQFAEIKKKPCCSL*ISVP*ALGAKLSERSTLSVKEEIMKGYIQTITH 306
           H   K  +R  +  FAE  ++    L I+VP +     + +S LS  EE++K Y   +  
Sbjct: 246 HAGLKGGIRATEVSFAEYCQRAVDGLGITVPESDVHSAATQSRLSRWEEVVKFYTIRLM- 304

Query: 307 FAGLRQSIVFYHRRLML 357
           FA L ++IV Y R L L
Sbjct: 305 FAPLIETIVLYDRWLFL 321


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,421,459
Number of Sequences: 1657284
Number of extensions: 5611618
Number of successful extensions: 8697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8697
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)