Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M04
         (400 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   271   2e-73
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   270   6e-73
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   270   6e-73
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   270   6e-73
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   170   7e-43
AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-P...    29   3.0  
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    27   7.0  
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    27   7.0  
AY069085-1|AAL39230.1|  517|Drosophila melanogaster GH10154p pro...    27   7.0  
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P...    27   7.0  
AY051973-1|AAK93397.1|  316|Drosophila melanogaster LD43650p pro...    27   9.2  
AF176011-1|AAD52649.1|  316|Drosophila melanogaster mitochondria...    27   9.2  
AE014296-29|AAN11421.1|  316|Drosophila melanogaster CG6851-PC, ...    27   9.2  
AE014296-28|AAN11420.1|  316|Drosophila melanogaster CG6851-PB, ...    27   9.2  
AE014296-27|AAF47342.1|  316|Drosophila melanogaster CG6851-PA, ...    27   9.2  
AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC...    27   9.2  
AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB...    27   9.2  
AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA...    27   9.2  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  271 bits (665), Expect = 2e-73
 Identities = 123/131 (93%), Positives = 126/131 (96%)
 Frame = +2

Query: 8   GRFVENTMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLV 187
           GR VE  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLV
Sbjct: 9   GRGVE--MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLV 66

Query: 188 SDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINNMLSCAGADRLQT 367
           SDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRIN MLSCAGADRLQT
Sbjct: 67  SDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQT 126

Query: 368 GMRGAFGKPQG 400
           GMRGAFGKPQG
Sbjct: 127 GMRGAFGKPQG 137


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  270 bits (661), Expect = 6e-73
 Identities = 119/124 (95%), Positives = 122/124 (98%)
 Frame = +2

Query: 29  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINNMLSCAGADRLQTGMRGAFG 388
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRIN MLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 389 KPQG 400
           KPQG
Sbjct: 121 KPQG 124


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  270 bits (661), Expect = 6e-73
 Identities = 119/124 (95%), Positives = 122/124 (98%)
 Frame = +2

Query: 29  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINNMLSCAGADRLQTGMRGAFG 388
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRIN MLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 389 KPQG 400
           KPQG
Sbjct: 121 KPQG 124


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  270 bits (661), Expect = 6e-73
 Identities = 119/124 (95%), Positives = 122/124 (98%)
 Frame = +2

Query: 29  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 208
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 20  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 79

Query: 209 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINNMLSCAGADRLQTGMRGAFG 388
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRIN MLSCAGADRLQTGMRGAFG
Sbjct: 80  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 139

Query: 389 KPQG 400
           KPQG
Sbjct: 140 KPQG 143


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  170 bits (413), Expect = 7e-43
 Identities = 79/97 (81%), Positives = 85/97 (87%)
 Frame = +2

Query: 8   GRFVENTMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLV 187
           GR VE  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLV
Sbjct: 2   GRGVE--MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLV 59

Query: 188 SDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMR 298
           SDEYEQLSSEALEAGRICCNK ++   G D+    MR
Sbjct: 60  SDEYEQLSSEALEAGRICCNK-MLSCAGADRLQTGMR 95


>AE014298-1832|AAF48218.2|  418|Drosophila melanogaster CG12716-PA
           protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -3

Query: 224 PAPQNSAARTHQTLSARIVGSHPLSLSFCPSRKYGSLGQAHPDKTEI*DTVYSYNIDNIS 45
           P P  S   T  T +AR+  + P S S  P R    +  A+P    +   + +YN+ NI 
Sbjct: 244 PRPFFSTTTTRITTTARMRPTKPTSTSPSPMRFQQLMNVANP-MVSVSQAIDAYNVYNIP 302

Query: 44  LVG 36
            VG
Sbjct: 303 DVG 305


>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
            protein.
          Length = 3712

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +2

Query: 80   PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 241
            P S  CRGV  P       I D  K   T D        +LV    +Q + + L      
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333

Query: 242  CNKYLVKNCGKDQFHI 289
              K  ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
          Length = 3712

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +2

Query: 80   PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 241
            P S  CRGV  P       I D  K   T D        +LV    +Q + + L      
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333

Query: 242  CNKYLVKNCGKDQFHI 289
              K  ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349


>AY069085-1|AAL39230.1|  517|Drosophila melanogaster GH10154p
           protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 183 KCTHSGKSSTVALFLPKSKIRIFGSGTPRQNRDLGYGLFLQYR 55
           + +HSG+S+T+   LP   +   GSG     + L Y   +Q R
Sbjct: 451 RISHSGRSATLRNSLPAESLSSGGSGGGGHRKRLSYQQEMQQR 493


>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
            protein.
          Length = 3712

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +2

Query: 80   PKSRFCRGVPDP----KIRIFDLGKKRATVD--DFPLCVHLVSDEYEQLSSEALEAGRIC 241
            P S  CRGV  P       I D  K   T D        +LV    +Q + + L      
Sbjct: 1274 PSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFD 1333

Query: 242  CNKYLVKNCGKDQFHI 289
              K  ++NCG D FHI
Sbjct: 1334 QTKEFIQNCGHDHFHI 1349


>AY051973-1|AAK93397.1|  316|Drosophila melanogaster LD43650p
           protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 302 HPFHVIRINNMLSCAGADRLQTGMRGA 382
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AF176011-1|AAD52649.1|  316|Drosophila melanogaster mitochondrial
           carrier homolog protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 302 HPFHVIRINNMLSCAGADRLQTGMRGA 382
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AE014296-29|AAN11421.1|  316|Drosophila melanogaster CG6851-PC,
           isoform C protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 302 HPFHVIRINNMLSCAGADRLQTGMRGA 382
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AE014296-28|AAN11420.1|  316|Drosophila melanogaster CG6851-PB,
           isoform B protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 302 HPFHVIRINNMLSCAGADRLQTGMRGA 382
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AE014296-27|AAF47342.1|  316|Drosophila melanogaster CG6851-PA,
           isoform A protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 302 HPFHVIRINNMLSCAGADRLQTGMRGA 382
           HPFHVI +  M    G + L T + G+
Sbjct: 150 HPFHVISLRMMAQFVGRETLYTSIVGS 176


>AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC,
           isoform C protein.
          Length = 2682

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 194 HQTLSARIVGSHPLSLSFC 138
           H TL+AR++G  PL  S+C
Sbjct: 312 HTTLTARLIGLEPLIESYC 330


>AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB,
           isoform B protein.
          Length = 2720

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 194 HQTLSARIVGSHPLSLSFC 138
           H TL+AR++G  PL  S+C
Sbjct: 312 HTTLTARLIGLEPLIESYC 330


>AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA,
           isoform A protein.
          Length = 2771

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 194 HQTLSARIVGSHPLSLSFC 138
           H TL+AR++G  PL  S+C
Sbjct: 312 HTTLTARLIGLEPLIESYC 330


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,613,127
Number of Sequences: 53049
Number of extensions: 445228
Number of successful extensions: 1301
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)