Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M03
         (351 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09065-1|CAA70286.1|  149|Drosophila melanogaster cytochrome c o...   110   4e-25
BT011037-1|AAR30197.1|  149|Drosophila melanogaster RE42582p pro...   110   6e-25
AE014297-1390|AAN13534.1|  149|Drosophila melanogaster CG14724-P...   110   6e-25
AE014297-1389|AAF54706.1|  149|Drosophila melanogaster CG14724-P...   110   6e-25
AY119011-1|AAM50871.1|  398|Drosophila melanogaster LP04014p pro...    28   3.8  
AE014297-1623|AAF54896.2|  398|Drosophila melanogaster CG11668-P...    28   3.8  
U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft ...    27   5.1  
AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD2272...    27   5.1  
AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB...    27   5.1  
BT029631-1|ABL75690.1|  113|Drosophila melanogaster IP17147p pro...    27   8.9  
BT001859-1|AAN71622.1|  618|Drosophila melanogaster RH65876p pro...    27   8.9  
AY051804-1|AAK93228.1|  637|Drosophila melanogaster LD31969p pro...    27   8.9  
AE014297-4220|AAF56778.2|  540|Drosophila melanogaster CG16918-P...    27   8.9  
AE014296-3291|AAF49057.1|  352|Drosophila melanogaster CG6996-PA...    27   8.9  
AE013599-2822|AAM68436.1|  592|Drosophila melanogaster CG15118-P...    27   8.9  
AE013599-2821|AAM68435.1|  637|Drosophila melanogaster CG15118-P...    27   8.9  
AE013599-2820|AAF57600.2|  637|Drosophila melanogaster CG15118-P...    27   8.9  
AE013599-2819|AAG22258.2|  637|Drosophila melanogaster CG15118-P...    27   8.9  

>Y09065-1|CAA70286.1|  149|Drosophila melanogaster cytochrome c
           oxidase subunit Vapreprotein protein.
          Length = 149

 Score =  110 bits (265), Expect = 4e-25
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = +3

Query: 132 GPVESDEEFDSRYEAFFNRKDIDAWEILXGMNDLCGMDLVPDPKIIKSALHACRRVNDYA 311
           G  ES EEFD RYE +F+R+ ID WEI  GMNDL GMDLVP+PKII++ L A RRVND A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPNPKIIEAGLRASRRVNDIA 91

Query: 312 LAVRFIEACKDKC 350
           LA+R++E CKDKC
Sbjct: 92  LAIRWLEGCKDKC 104


>BT011037-1|AAR30197.1|  149|Drosophila melanogaster RE42582p
           protein.
          Length = 149

 Score =  110 bits (264), Expect = 6e-25
 Identities = 49/73 (67%), Positives = 57/73 (78%)
 Frame = +3

Query: 132 GPVESDEEFDSRYEAFFNRKDIDAWEILXGMNDLCGMDLVPDPKIIKSALHACRRVNDYA 311
           G  ES EEFD RYE +F+R+ ID WEI  GMNDL GMDLVP PKII++ L A RRVND A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIA 91

Query: 312 LAVRFIEACKDKC 350
           LA+R++E CKDKC
Sbjct: 92  LAIRWLEGCKDKC 104


>AE014297-1390|AAN13534.1|  149|Drosophila melanogaster CG14724-PB,
           isoform B protein.
          Length = 149

 Score =  110 bits (264), Expect = 6e-25
 Identities = 49/73 (67%), Positives = 57/73 (78%)
 Frame = +3

Query: 132 GPVESDEEFDSRYEAFFNRKDIDAWEILXGMNDLCGMDLVPDPKIIKSALHACRRVNDYA 311
           G  ES EEFD RYE +F+R+ ID WEI  GMNDL GMDLVP PKII++ L A RRVND A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIA 91

Query: 312 LAVRFIEACKDKC 350
           LA+R++E CKDKC
Sbjct: 92  LAIRWLEGCKDKC 104


>AE014297-1389|AAF54706.1|  149|Drosophila melanogaster CG14724-PA,
           isoform A protein.
          Length = 149

 Score =  110 bits (264), Expect = 6e-25
 Identities = 49/73 (67%), Positives = 57/73 (78%)
 Frame = +3

Query: 132 GPVESDEEFDSRYEAFFNRKDIDAWEILXGMNDLCGMDLVPDPKIIKSALHACRRVNDYA 311
           G  ES EEFD RYE +F+R+ ID WEI  GMNDL GMDLVP PKII++ L A RRVND A
Sbjct: 32  GTEESAEEFDKRYEKYFSREGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIA 91

Query: 312 LAVRFIEACKDKC 350
           LA+R++E CKDKC
Sbjct: 92  LAIRWLEGCKDKC 104


>AY119011-1|AAM50871.1|  398|Drosophila melanogaster LP04014p
           protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 170 ISAIEFFIRLDWAAVSPSYRNYSAYHRCW-DQRPFQDMGQCTR 45
           IS + +     W AV+PSY +   Y  C    RP   +G+C R
Sbjct: 17  ISTLAYAQNAPWNAVAPSYLSIDIYGNCQAHDRPL--IGKCVR 57


>AE014297-1623|AAF54896.2|  398|Drosophila melanogaster CG11668-PA
           protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 170 ISAIEFFIRLDWAAVSPSYRNYSAYHRCW-DQRPFQDMGQCTR 45
           IS + +     W AV+PSY +   Y  C    RP   +G+C R
Sbjct: 17  ISTLAYAQNAPWNAVAPSYLSIDIYGNCQAHDRPL--IGKCVR 57


>U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft
           protein protein.
          Length = 1106

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 15/74 (20%), Positives = 28/74 (37%)
 Frame = -2

Query: 242 HATKVVHPXKNFPGINVFSVEEGFISAIEFFIRLDWAAVSPSYRNYSAYHRCWDQRPFQD 63
           H   V H   NF    +    +         +   + +V+PS  N+S+++  +   PF  
Sbjct: 105 HFANVSHQSPNFYSQAMIPTYQNGDGIARVTVTSSYGSVNPSNSNFSSFYTPFGNNPFDF 164

Query: 62  MGQCTRSRLQHFVP 21
                ++    FVP
Sbjct: 165 SASKLQASAPEFVP 178


>AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD22726
           protein.
          Length = 1106

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 15/74 (20%), Positives = 28/74 (37%)
 Frame = -2

Query: 242 HATKVVHPXKNFPGINVFSVEEGFISAIEFFIRLDWAAVSPSYRNYSAYHRCWDQRPFQD 63
           H   V H   NF    +    +         +   + +V+PS  N+S+++  +   PF  
Sbjct: 105 HFANVSHQSPNFYSQAMIPTYQNGDGIARVTVTSSYGSVNPSNSNFSSFYTPFGNNPFDF 164

Query: 62  MGQCTRSRLQHFVP 21
                ++    FVP
Sbjct: 165 SASKLQASAPEFVP 178


>AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB,
           isoform B protein.
          Length = 1106

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 15/74 (20%), Positives = 28/74 (37%)
 Frame = -2

Query: 242 HATKVVHPXKNFPGINVFSVEEGFISAIEFFIRLDWAAVSPSYRNYSAYHRCWDQRPFQD 63
           H   V H   NF    +    +         +   + +V+PS  N+S+++  +   PF  
Sbjct: 105 HFANVSHQSPNFYSQAMIPTYQNGDGIARVTVTSSYGSVNPSNSNFSSFYTPFGNNPFDF 164

Query: 62  MGQCTRSRLQHFVP 21
                ++    FVP
Sbjct: 165 SASKLQASAPEFVP 178


>BT029631-1|ABL75690.1|  113|Drosophila melanogaster IP17147p
           protein.
          Length = 113

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 195 IDAWEILXGMNDLCGMDLVPD 257
           +D WE+L G N + G DL+P+
Sbjct: 23  VDIWEVLRGQN-VVGSDLLPE 42


>BT001859-1|AAN71622.1|  618|Drosophila melanogaster RH65876p
           protein.
          Length = 618

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 195 IDAWEILXGMNDLCGMDLVPD 257
           +D WE+L G N + G DL+P+
Sbjct: 521 VDIWEVLRGQN-VVGSDLLPE 540


>AY051804-1|AAK93228.1|  637|Drosophila melanogaster LD31969p
           protein.
          Length = 637

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 195 IDAWEILXGMNDLCGMDLVPD 257
           +D WE+L G N + G DL+P+
Sbjct: 540 VDIWEVLRGQN-VVGSDLLPE 559


>AE014297-4220|AAF56778.2|  540|Drosophila melanogaster CG16918-PA
           protein.
          Length = 540

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 268 LNLLSTPAGESMTMLSLSGLSRRAKT 345
           +NL + PA  SMT+L+L G+   +KT
Sbjct: 102 INLDACPATRSMTLLNLKGMRLGSKT 127


>AE014296-3291|AAF49057.1|  352|Drosophila melanogaster CG6996-PA
           protein.
          Length = 352

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -2

Query: 203 GINVFSVEEGFISAIEFFIRLDWAAVSPSYRNYSAYHRC 87
           G   FS+E G  S   FF+  D  A  P  +    Y RC
Sbjct: 223 GNGEFSLEHGVCSDGRFFLATDGGACVPRSKVKCGYDRC 261


>AE013599-2822|AAM68436.1|  592|Drosophila melanogaster CG15118-PD,
           isoform D protein.
          Length = 592

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 195 IDAWEILXGMNDLCGMDLVPD 257
           +D WE+L G N + G DL+P+
Sbjct: 495 VDIWEVLRGQN-VVGSDLLPE 514


>AE013599-2821|AAM68435.1|  637|Drosophila melanogaster CG15118-PC,
           isoform C protein.
          Length = 637

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 195 IDAWEILXGMNDLCGMDLVPD 257
           +D WE+L G N + G DL+P+
Sbjct: 540 VDIWEVLRGQN-VVGSDLLPE 559


>AE013599-2820|AAF57600.2|  637|Drosophila melanogaster CG15118-PB,
           isoform B protein.
          Length = 637

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 195 IDAWEILXGMNDLCGMDLVPD 257
           +D WE+L G N + G DL+P+
Sbjct: 540 VDIWEVLRGQN-VVGSDLLPE 559


>AE013599-2819|AAG22258.2|  637|Drosophila melanogaster CG15118-PA,
           isoform A protein.
          Length = 637

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 195 IDAWEILXGMNDLCGMDLVPD 257
           +D WE+L G N + G DL+P+
Sbjct: 540 VDIWEVLRGQN-VVGSDLLPE 559


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,659,033
Number of Sequences: 53049
Number of extensions: 328645
Number of successful extensions: 699
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)