Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M02
         (221 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   1.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   2.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   6.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    19   6.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   8.4  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 1.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 163 PAKPTAAIPRPARIIELRHGNNTPF 89
           PAK T A+P    ++     NN  F
Sbjct: 642 PAKDTIAVPNNGYVVLRLRANNPGF 666


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 2.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 84  VQNGVLLPWRSSIILAGLGMAAVGFAGRYV 173
           V N   L W  ++I   L    + FAG  V
Sbjct: 112 VANAFFLLWTPAVIFVVLSKNGIVFAGLIV 141


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 191 VRHLS*DVTTSETNCCHTKTS 129
           V HLS D TT   +  H K S
Sbjct: 123 VNHLSSDSTTIHWHGHHQKNS 143


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 109 HGNNTPFCTHDSSNIIRTFY 50
           HG+NT    + + N   T+Y
Sbjct: 291 HGHNTSSHNYYAQNYAPTYY 310


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 18.6 bits (36), Expect = 8.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 73  MSRVYRTEYY 102
           +S VYRT++Y
Sbjct: 47  ISGVYRTDFY 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,323
Number of Sequences: 336
Number of extensions: 782
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  3009020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)