Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M02
         (221 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071438-1|AAL49060.1|  118|Drosophila melanogaster RE52392p pro...    49   8e-07
AE014296-1970|AAF50050.2|  118|Drosophila melanogaster CG7394-PA...    49   8e-07
AE013599-1262|AAF58672.1|  199|Drosophila melanogaster CG13208-P...    26   6.2  

>AY071438-1|AAL49060.1|  118|Drosophila melanogaster RE52392p
           protein.
          Length = 118

 Score = 49.2 bits (112), Expect = 8e-07
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = +3

Query: 114 SSIILAGLGMAAVGFAGRYVLRQMPNASVKLAEAMK 221
           SS+ILAGL +AAVGFAG++++R+MP  + K  EA+K
Sbjct: 3   SSVILAGLSVAAVGFAGKHLMRRMPQMTTKFNEALK 38


>AE014296-1970|AAF50050.2|  118|Drosophila melanogaster CG7394-PA
           protein.
          Length = 118

 Score = 49.2 bits (112), Expect = 8e-07
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = +3

Query: 114 SSIILAGLGMAAVGFAGRYVLRQMPNASVKLAEAMK 221
           SS+ILAGL +AAVGFAG++++R+MP  + K  EA+K
Sbjct: 3   SSVILAGLSVAAVGFAGKHLMRRMPQMTTKFNEALK 38


>AE013599-1262|AAF58672.1|  199|Drosophila melanogaster CG13208-PA
           protein.
          Length = 199

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 207 PISQRR*AFVLGRNDQRNQLLPYQDQPELLSFAMVII 97
           P SQRR A ++ +  Q  Q    Q QP    F+ +++
Sbjct: 127 PQSQRRLAMIMQQQQQVQQQKTQQQQPRCSPFSAIVL 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,470,111
Number of Sequences: 53049
Number of extensions: 148752
Number of successful extensions: 276
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 24,988,368
effective HSP length: 53
effective length of database: 22,176,771
effective search space used: 443535420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)