Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_M01
(271 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 52 1e-08
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 46 1e-06
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 38 2e-04
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 36 0.001
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 36 0.001
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 33 0.005
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 29 0.11
SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual 28 0.26
SPAC4H3.04c |||UPF0103 family|Schizosaccharomyces pombe|chr 1|||... 27 0.61
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 26 0.80
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 26 1.1
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 1.9
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 25 2.5
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 24 3.2
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 24 3.2
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 24 4.3
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 23 5.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 5.7
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 23 7.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 23 7.5
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 23 9.9
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 23 9.9
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 52.4 bits (120), Expect = 1e-08
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +2
Query: 74 INDFDDLKTMLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMA 199
++D + K+++ + DKLVV+DF ATWCGPCK I PK ++ +
Sbjct: 5 VSDSSEFKSIVCQ--DKLVVVDFFATWCGPCKAIAPKFEQFS 44
Score = 23.4 bits (48), Expect = 5.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 225 FLSVDVDECEDIAAE 269
F+ VDVD+ +IAAE
Sbjct: 52 FIKVDVDQLSEIAAE 66
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 45.6 bits (103), Expect = 1e-06
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 74 INDFDDLKTMLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMA 199
+ F D T +S DK+ V+DF A WCGPCK + P L++++
Sbjct: 22 VESFGDYNTRIS--ADKVTVVDFYADWCGPCKYLKPFLEKLS 61
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 37.9 bits (84), Expect = 2e-04
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 68 IHINDFDDLKTMLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMAIFMYDSIVVL 229
+ + ++L+ + A K +I+F ATWCG CK + P +E+ D VL
Sbjct: 23 VELQSLNELENTI-RASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVL 75
Score = 30.3 bits (65), Expect = 0.049
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 122 KLVVIDFMATWCGPCKMIGPKLDEM 196
K V+++F A WCG CK + P + +
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETL 183
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 35.9 bits (79), Expect = 0.001
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +2
Query: 77 NDFDDLKTMLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMA-IFMYDSIVVL 229
++FDD+ ++ E D V+++F A WCG CK + P +++A + DS VV+
Sbjct: 363 DNFDDI--VMDETKD--VLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVV 410
Score = 34.3 bits (75), Expect = 0.003
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 119 DKLVVIDFMATWCGPCKMIGPKLDEMA 199
DK++++ F A WCG CK + P+ + A
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAA 65
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 35.9 bits (79), Expect = 0.001
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 62 MSIHINDFDDLKTMLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMA 199
MS+ I + + +L +++++++F A W PCK + D+ A
Sbjct: 1 MSVEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFA 46
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 33.5 bits (73), Expect = 0.005
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 128 VVIDFMATWCGPCKMIGPKLDEMA 199
+ +D A WCGPCK I P ++A
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLA 45
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 29.1 bits (62), Expect = 0.11
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 65 SIHINDFDDLKTMLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMAIFMYDSIVV 226
+I +N + + + G LVV F A WCG CK + P ++A ++ + V
Sbjct: 33 TIELNS-KNFRKFVKAKGPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPV 83
>SPAC11D3.09 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 27.9 bits (59), Expect = 0.26
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = -1
Query: 214 VVHKDSHLVEFGPDHLAGSAPSRHEVNHDELVARLRQHGL 95
++H DSHL + P G S +NH Q GL
Sbjct: 205 IIHFDSHLDSWKPKVFGGGKSSVGSINHGTYFYHASQEGL 244
>SPAC4H3.04c |||UPF0103 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 0.61
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 201 SLCTTPLLFLSVDVDECEDIAA 266
S+C+TPL L VD D C+ + A
Sbjct: 91 SICSTPLGDLKVDEDLCQKLVA 112
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 26.2 bits (55), Expect = 0.80
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 154 PSRHEVNHDELVARLRQHGLQVIEVIDVDRHFVPLNRKTIK 32
PS + D++VA LRQ + I RH + ++R K
Sbjct: 335 PSSQNDSFDDVVACLRQKSTPYLSFIKKARHLIQVSRDKYK 375
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.8 bits (54), Expect = 1.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -1
Query: 151 SRHEVNHDELVARLRQHGLQVIEVIDVDRHFVPLNR 44
S++ NHD+ + + + + I++ +HF P+ R
Sbjct: 317 SKNNENHDQSENKEEEEDMMLTRPIEIPQHFSPIAR 352
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.0 bits (52), Expect = 1.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 148 RHEVNHDELVARLRQHGLQVIEVIDVDRHFVPLNR 44
+H+++HDE R + +I+ + D + LNR
Sbjct: 641 KHDIHHDEKERRTTVDNVSIIDFNEEDTVYKMLNR 675
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 24.6 bits (51), Expect = 2.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 107 SEAGDKLVVIDFMATWCGPCKMIGPKLDEM 196
SE I + CG CK +GP D M
Sbjct: 38 SEVSKGTWFIKYYLPSCGACKRLGPMWDNM 67
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 24.2 bits (50), Expect = 3.2
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -3
Query: 122 CRPPPTAWSSSHRSH*CGSTFC 57
CR P T + H CG FC
Sbjct: 179 CRTPFTFTNRKHHCRNCGGVFC 200
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 24.2 bits (50), Expect = 3.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 132 TTSLSPASDSMVFKSSKSLMWIDILYL 52
T +LSP SM K SK+L+ +LYL
Sbjct: 343 TIALSPTKLSMASKHSKNLVSERMLYL 369
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 23.8 bits (49), Expect = 4.3
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 130 DELVARLRQHGLQVI-EVIDVDRHFVPLNRK 41
D+++ L++ Q + E ID+ + V LNRK
Sbjct: 465 DDIIEGLKRGSDQCVQEAIDISKFIVQLNRK 495
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 23.4 bits (48), Expect = 5.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 83 FDDLKTMLSEAGDKL 127
+DDL L+EAGD+L
Sbjct: 33 YDDLGNQLNEAGDEL 47
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.4 bits (48), Expect = 5.7
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +3
Query: 174 SGPNSTRWLSLCTTPLLFLSVDVDECEDI 260
S P++ +L CT+ + F++ + CE++
Sbjct: 471 SSPSNIAFLEYCTSTMEFINQLIVACEEL 499
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 138 SITTSLSPASDSMVFKSSKSLMWIDI 61
SI+T + P++ MVF S +W +I
Sbjct: 352 SISTFVPPSNGLMVFTSGIPSVWAEI 377
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 23.0 bits (47), Expect = 7.5
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -2
Query: 225 TTMESYIKIAISSSLGPIILQGPHQVAMKSITTSLS----PASDSMVFKSSK 82
TT + +I+ + S I++ P S TT+++ PA+++++ +SSK
Sbjct: 299 TTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTPAANTIISRSSK 350
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 22.6 bits (46), Expect = 9.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 158 RTKSP*SQSRRACRPPPTAWSSSHRSH 78
R K+ + SR PP+A S+++R H
Sbjct: 525 RVKNTQNPSRSISAEPPSATSTANRRH 551
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 22.6 bits (46), Expect = 9.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 180 PNSTRWLSLCTTPLLFLSVDVDECE 254
PN T WLS + L D+DE +
Sbjct: 295 PNVTAWLSYNSDASYDLGPDIDEID 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,103,847
Number of Sequences: 5004
Number of extensions: 18623
Number of successful extensions: 60
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 57602552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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