Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M01
         (271 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    68   5e-14
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   2.0  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           22   3.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    22   4.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    22   4.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   6.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    21   6.1  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    21   6.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    21   8.0  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 68.1 bits (159), Expect = 5e-14
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = +2

Query: 74  INDFDDLKTMLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMAIFMYDSIVVLK 232
           + D +D    L  AGD+LVV+DF ATWCGPCK+I PKL+E      D IVV+K
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVK 57



 Score = 27.1 bits (57), Expect = 0.12
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 162 PAR*SGPNSTRWLSLCTTPLLFLSVDVDECEDIAAE 269
           P +   P    + +     ++ + VDVDECE++AA+
Sbjct: 34  PCKVIAPKLEEFQNKYADKIVVVKVDVDECEELAAQ 69


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 208  HKDSHLVEFGPDHLAGSAPSRHEVNHDELVARLRQHGLQVIEV-IDV 71
            HK S ++EF P H     PS  +++  E++ +   +  Q +++ +DV
Sbjct: 982  HKPSTILEFRPKH---QGPSEVQLHFLEMLTKAVHNLFQYMDIPVDV 1025


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 156 ADPAR*SGPNSTRWLS 203
           ADP+R SGP+S  W+S
Sbjct: 214 ADPSRNSGPSS--WMS 227


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 186 SLGPIILQGPHQVAMKSITTSLSPASDSMVFKSSKS 79
           S+GP +++    +A+   +TS+    D+M   S  S
Sbjct: 621 SIGPGVVESTASIAVGIGSTSVDAVGDAMASSSPAS 656


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 186 SLGPIILQGPHQVAMKSITTSLSPASDSMVFKSSKS 79
           S+GP +++    +A+   +TS+    D+M   S  S
Sbjct: 621 SIGPGVVESTASIAVGIGSTSVDAVGDAMASSSPAS 656


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 136  NHDELVARLRQHGLQVIEVIDVDRH 62
            +HD+L+     HGL+ +++  +  H
Sbjct: 2285 DHDQLIKAKYFHGLEELKLAPLTHH 2309


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 161 VRTKSP*SQSRRACRPPPT 105
           V  K   + SRRACRP  T
Sbjct: 3   VMLKQEVNLSRRACRPTTT 21


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 159 PHQVAMKSITTSLSPASDSMVF 94
           PH  A      ++  ASDS++F
Sbjct: 44  PHSEAQLRSVAAMEQASDSLIF 65


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 101 WSSSHRSH 78
           W+SSHR+H
Sbjct: 6   WTSSHRAH 13


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,565
Number of Sequences: 2352
Number of extensions: 5484
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15293985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)