Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L24
(393 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019303-1|AAH19303.1| 75|Homo sapiens chromosome 3 open readi... 120 2e-27
BC007929-1|AAH07929.1| 75|Homo sapiens chromosome 3 open readi... 120 2e-27
BC001067-1|AAH01067.1| 75|Homo sapiens chromosome 3 open readi... 120 2e-27
AY148220-1|AAN60162.1| 75|Homo sapiens Brk1-like protein protein. 120 2e-27
AY148219-1|AAN60161.1| 75|Homo sapiens Brk1-like protein protein. 120 2e-27
Y11834-1|CAA72532.1| 188|Homo sapiens interferon alpha 2 protein. 30 2.4
V00549-1|CAA23810.1| 188|Homo sapiens protein ( Messenger RNA f... 30 2.4
V00548-1|CAA23809.1| 182|Homo sapiens interferon alpha-2 precur... 30 2.4
V00544-1|CAA23805.1| 188|Homo sapiens protein ( Messenger RNA f... 30 2.4
M54886-1|AAA59181.1| 188|Homo sapiens interferon protein. 30 2.4
M29883-1|AAA52715.1| 165|Homo sapiens IFNA protein. 30 2.4
J00207-1|AAB59402.1| 188|Homo sapiens interferon alpha-a protein. 30 2.4
CR541921-1|CAG46719.1| 188|Homo sapiens IFNA2 protein. 30 2.4
BC104164-1|AAI04165.1| 188|Homo sapiens interferon, alpha 2 pro... 30 2.4
BC104163-1|AAI04164.1| 188|Homo sapiens interferon, alpha 2 pro... 30 2.4
BC074937-1|AAH74937.1| 188|Homo sapiens interferon, alpha 2 pro... 30 2.4
BC074936-1|AAH74936.1| 188|Homo sapiens interferon, alpha 2 pro... 30 2.4
AY532915-1|AAS92248.1| 154|Homo sapiens interferon alpha A prot... 30 2.4
AY255838-1|AAP20099.1| 166|Homo sapiens interferon alpha 2b pro... 30 2.4
AL353732-3|CAH72906.1| 188|Homo sapiens interferon, alpha 2 pro... 30 2.4
BC056414-1|AAH56414.1| 442|Homo sapiens plasmalemma vesicle ass... 29 4.1
BC050365-1|AAH50365.2| 442|Homo sapiens plasmalemma vesicle ass... 29 4.1
AK096030-1|BAC04681.1| 437|Homo sapiens protein ( Homo sapiens ... 29 4.1
AF348827-1|AAK20040.1| 442|Homo sapiens PV1 protein protein. 29 4.1
AF326591-1|AAK11226.1| 442|Homo sapiens fenestrated-endothelial... 29 5.5
M63073-1|AAA52313.1| 101|Homo sapiens Duchenne muscular dystrop... 29 7.2
AL451144-3|CAI39564.1| 101|Homo sapiens dystrophin (muscular dy... 29 7.2
AL109609-2|CAI42948.1| 101|Homo sapiens dystrophin (muscular dy... 29 7.2
AL031643-2|CAI43056.1| 101|Homo sapiens dystrophin (muscular dy... 29 7.2
AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su... 28 9.5
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su... 28 9.5
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su... 28 9.5
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su... 28 9.5
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat... 28 9.5
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat... 28 9.5
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat... 28 9.5
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat... 28 9.5
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat... 28 9.5
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat... 28 9.5
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro... 28 9.5
>BC019303-1|AAH19303.1| 75|Homo sapiens chromosome 3 open reading
frame 10 protein.
Length = 75
Score = 120 bits (288), Expect = 2e-27
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 92 ETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLE 271
+ +Q++I QDW NREYIE+IT SIKKI DFLNSFDMSCRS LATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 272 ACVTKGETLT 301
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>BC007929-1|AAH07929.1| 75|Homo sapiens chromosome 3 open reading
frame 10 protein.
Length = 75
Score = 120 bits (288), Expect = 2e-27
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 92 ETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLE 271
+ +Q++I QDW NREYIE+IT SIKKI DFLNSFDMSCRS LATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 272 ACVTKGETLT 301
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>BC001067-1|AAH01067.1| 75|Homo sapiens chromosome 3 open reading
frame 10 protein.
Length = 75
Score = 120 bits (288), Expect = 2e-27
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 92 ETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLE 271
+ +Q++I QDW NREYIE+IT SIKKI DFLNSFDMSCRS LATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 272 ACVTKGETLT 301
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>AY148220-1|AAN60162.1| 75|Homo sapiens Brk1-like protein protein.
Length = 75
Score = 120 bits (288), Expect = 2e-27
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 92 ETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLE 271
+ +Q++I QDW NREYIE+IT SIKKI DFLNSFDMSCRS LATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 272 ACVTKGETLT 301
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>AY148219-1|AAN60161.1| 75|Homo sapiens Brk1-like protein protein.
Length = 75
Score = 120 bits (288), Expect = 2e-27
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 92 ETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLE 271
+ +Q++I QDW NREYIE+IT SIKKI DFLNSFDMSCRS LATLNEKLT+LER+I+Y+E
Sbjct: 6 DPVQREIHQDWANREYIEIITSSIKKIADFLNSFDMSCRSRLATLNEKLTALERRIEYIE 65
Query: 272 ACVTKGETLT 301
A VTKGETLT
Sbjct: 66 ARVTKGETLT 75
>Y11834-1|CAA72532.1| 188|Homo sapiens interferon alpha 2 protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>V00549-1|CAA23810.1| 188|Homo sapiens protein ( Messenger RNA for
human leukocyte (alpha) interferon. ).
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>V00548-1|CAA23809.1| 182|Homo sapiens interferon alpha-2 precursor
protein.
Length = 182
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 57 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 116
Query: 281 TKGETLT 301
+G +T
Sbjct: 117 IQGVGVT 123
>V00544-1|CAA23805.1| 188|Homo sapiens protein ( Messenger RNA for
human leukocyte interferon. ).
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>M54886-1|AAA59181.1| 188|Homo sapiens interferon protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>M29883-1|AAA52715.1| 165|Homo sapiens IFNA protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 40 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 99
Query: 281 TKGETLT 301
+G +T
Sbjct: 100 IQGVGVT 106
>J00207-1|AAB59402.1| 188|Homo sapiens interferon alpha-a protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>CR541921-1|CAG46719.1| 188|Homo sapiens IFNA2 protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>BC104164-1|AAI04165.1| 188|Homo sapiens interferon, alpha 2
protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>BC104163-1|AAI04164.1| 188|Homo sapiens interferon, alpha 2
protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>BC074937-1|AAH74937.1| 188|Homo sapiens interferon, alpha 2
protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>BC074936-1|AAH74936.1| 188|Homo sapiens interferon, alpha 2
protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>AY532915-1|AAS92248.1| 154|Homo sapiens interferon alpha A
protein.
Length = 154
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 39 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 98
Query: 281 TKGETLT 301
+G +T
Sbjct: 99 IQGVGVT 105
>AY255838-1|AAP20099.1| 166|Homo sapiens interferon alpha 2b
protein.
Length = 166
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 41 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 100
Query: 281 TKGETLT 301
+G +T
Sbjct: 101 IQGVGVT 107
>AL353732-3|CAH72906.1| 188|Homo sapiens interferon, alpha 2
protein.
Length = 188
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +2
Query: 101 QKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACV 280
Q++ + E I V+ I++I + ++ D S L++ T L ++++ LEACV
Sbjct: 63 QEEFGNQFQKAETIPVLHEMIQQIFNLFSTKDSSAAWDETLLDKFYTELYQQLNDLEACV 122
Query: 281 TKGETLT 301
+G +T
Sbjct: 123 IQGVGVT 129
>BC056414-1|AAH56414.1| 442|Homo sapiens plasmalemma vesicle
associated protein protein.
Length = 442
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 NREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACVTK 286
N+ Y+ I S K+ D + SC + L LN+K+ +LE +I + TK
Sbjct: 129 NQRYMAAIILSEKQCRDQFKDMNKSCDALLFMLNQKVKTLEVEIAKEKTICTK 181
>BC050365-1|AAH50365.2| 442|Homo sapiens plasmalemma vesicle
associated protein protein.
Length = 442
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 NREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACVTK 286
N+ Y+ I S K+ D + SC + L LN+K+ +LE +I + TK
Sbjct: 129 NQRYMAAIILSEKQCRDQFKDMNKSCDALLFMLNQKVKTLEVEIAKEKTICTK 181
>AK096030-1|BAC04681.1| 437|Homo sapiens protein ( Homo sapiens
cDNA FLJ38711 fis, clone KIDNE2003507, highly similar to
Homo sapiens PV1 protein (PLVAP) mRNA. ).
Length = 437
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 NREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACVTK 286
N+ Y+ I S K+ D + SC + L LN+K+ +LE +I + TK
Sbjct: 129 NQRYMAAIILSEKQCRDQFKDMNKSCDALLFMLNQKVKTLEVEIAKEKTICTK 181
>AF348827-1|AAK20040.1| 442|Homo sapiens PV1 protein protein.
Length = 442
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 128 NREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACVTK 286
N+ Y+ I S K+ D + SC + L LN+K+ +LE +I + TK
Sbjct: 129 NQRYMAAIILSEKQCRDQFKDMNKSCDALLFMLNQKVKTLEVEIAKEKTICTK 181
>AF326591-1|AAK11226.1| 442|Homo sapiens fenestrated-endothelial
linked structure protein protein.
Length = 442
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 128 NREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYLEACVTK 286
N Y+ I S K+ D + SC + L LN+K+ +LE +I + TK
Sbjct: 129 NHRYMAAIILSEKQCRDQFKDMNKSCDALLFMLNQKVKTLEVEIAKEKTICTK 181
>M63073-1|AAA52313.1| 101|Homo sapiens Duchenne muscular dystrophy
protein protein.
Length = 101
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 89 RETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYL 268
RE +QK+ WVN ++ + I+K L S + L +K T +E K+ L
Sbjct: 13 REDVQKKTFTKWVNAQFSKATQKEIEKQKVHLKSITEVGEALKTVLGKKETLVEDKLSLL 72
Query: 269 EA 274
+
Sbjct: 73 NS 74
>AL451144-3|CAI39564.1| 101|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 101
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 89 RETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYL 268
RE +QK+ WVN ++ + I+K L S + L +K T +E K+ L
Sbjct: 13 REDVQKKTFTKWVNAQFSKATQKEIEKQKVHLKSITEVGEALKTVLGKKETLVEDKLSLL 72
Query: 269 EA 274
+
Sbjct: 73 NS 74
>AL109609-2|CAI42948.1| 101|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 101
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 89 RETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYL 268
RE +QK+ WVN ++ + I+K L S + L +K T +E K+ L
Sbjct: 13 REDVQKKTFTKWVNAQFSKATQKEIEKQKVHLKSITEVGEALKTVLGKKETLVEDKLSLL 72
Query: 269 EA 274
+
Sbjct: 73 NS 74
>AL031643-2|CAI43056.1| 101|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 101
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 89 RETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKIDYL 268
RE +QK+ WVN ++ + I+K L S + L +K T +E K+ L
Sbjct: 13 REDVQKKTFTKWVNAQFSKATQKEIEKQKVHLKSITEVGEALKTVLGKKETLVEDKLSLL 72
Query: 269 EA 274
+
Sbjct: 73 NS 74
>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3052
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1295 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1334
>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1373 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1412
>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1373 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1412
>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) protein.
Length = 3130
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1373 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1412
>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 2 protein.
Length = 3052
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1295 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1334
>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit variant 1 protein.
Length = 3052
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1295 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1334
>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1373 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1412
>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3052
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1295 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1334
>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1373 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1412
>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
catalytic subunit protein.
Length = 3130
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1373 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1412
>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta protein.
Length = 3052
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 143 EVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKID 262
++ +G KI D N+ + SS+ L+E SLE K+D
Sbjct: 1295 QISSGMSSKIEDNANNIQRNYLSSIGKLSEYRNSLESKLD 1334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,417,142
Number of Sequences: 237096
Number of extensions: 669150
Number of successful extensions: 1574
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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