Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L24
         (393 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3777|AAM68291.1|   76|Drosophila melanogaster CG30173-P...   129   1e-30
BT024977-1|ABE01207.1| 1096|Drosophila melanogaster IP14822p pro...    30   0.95 
AF054612-1|AAC39139.1| 1011|Drosophila melanogaster dynamin asso...    30   0.95 
AF053957-1|AAC39138.1| 1094|Drosophila melanogaster dynamin asso...    30   0.95 
AE014134-3341|AAF53962.1| 1097|Drosophila melanogaster CG1099-PA...    30   0.95 
AE014134-3340|AAN11099.1| 1014|Drosophila melanogaster CG1099-PB...    30   0.95 
AE014296-524|AAF47696.2|  583|Drosophila melanogaster CG9965-PA ...    29   2.9  

>AE013599-3777|AAM68291.1|   76|Drosophila melanogaster CG30173-PA
           protein.
          Length = 76

 Score =  129 bits (312), Expect = 1e-30
 Identities = 62/76 (81%), Positives = 65/76 (85%)
 Frame = +2

Query: 74  MSTPPRETIQKQIQQDWVNREYIEVITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLER 253
           MS   RE IQKQI QDW NREYIEVIT SIK+ITDFLNSFDMSCRS LA LNEKLT LER
Sbjct: 1   MSGAHREAIQKQIHQDWANREYIEVITASIKRITDFLNSFDMSCRSRLAVLNEKLTILER 60

Query: 254 KIDYLEACVTKGETLT 301
           +IDYLEACV +GETLT
Sbjct: 61  RIDYLEACVAQGETLT 76


>BT024977-1|ABE01207.1| 1096|Drosophila melanogaster IP14822p
           protein.
          Length = 1096

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +2

Query: 89  RETIQKQIQQDWVNREYIEVITGSIKKITDFLN--SFDMSCRSSLATLNEKLTSLERKID 262
           R+ ++KQ QQ+W      E+     ++    L   + +      L+TLNEK+  L ++I 
Sbjct: 417 RKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQLNVELSTLNEKIKELSQRIC 476

Query: 263 YLEACVTKGETL 298
              A VT  +T+
Sbjct: 477 DTRAGVTNVKTV 488


>AF054612-1|AAC39139.1| 1011|Drosophila melanogaster dynamin
           associated protein isoformDap160-2 protein.
          Length = 1011

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +2

Query: 89  RETIQKQIQQDWVNREYIEVITGSIKKITDFLN--SFDMSCRSSLATLNEKLTSLERKID 262
           R+ ++KQ QQ+W      E+     ++    L   + +      L+TLNEK+  L ++I 
Sbjct: 417 RKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQLNVELSTLNEKIKELSQRIC 476

Query: 263 YLEACVTKGETL 298
              A VT  +T+
Sbjct: 477 DTRAGVTNVKTV 488


>AF053957-1|AAC39138.1| 1094|Drosophila melanogaster dynamin
           associated protein isoformDap160-1 protein.
          Length = 1094

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +2

Query: 89  RETIQKQIQQDWVNREYIEVITGSIKKITDFLN--SFDMSCRSSLATLNEKLTSLERKID 262
           R+ ++KQ QQ+W      E+     ++    L   + +      L+TLNEK+  L ++I 
Sbjct: 417 RKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQLNVELSTLNEKIKELSQRIC 476

Query: 263 YLEACVTKGETL 298
              A VT  +T+
Sbjct: 477 DTRAGVTNVKTV 488


>AE014134-3341|AAF53962.1| 1097|Drosophila melanogaster CG1099-PA,
           isoform A protein.
          Length = 1097

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +2

Query: 89  RETIQKQIQQDWVNREYIEVITGSIKKITDFLN--SFDMSCRSSLATLNEKLTSLERKID 262
           R+ ++KQ QQ+W      E+     ++    L   + +      L+TLNEK+  L ++I 
Sbjct: 417 RKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQLNVELSTLNEKIKELSQRIC 476

Query: 263 YLEACVTKGETL 298
              A VT  +T+
Sbjct: 477 DTRAGVTNVKTV 488


>AE014134-3340|AAN11099.1| 1014|Drosophila melanogaster CG1099-PB,
           isoform B protein.
          Length = 1014

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +2

Query: 89  RETIQKQIQQDWVNREYIEVITGSIKKITDFLN--SFDMSCRSSLATLNEKLTSLERKID 262
           R+ ++KQ QQ+W      E+     ++    L   + +      L+TLNEK+  L ++I 
Sbjct: 417 RKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQLNVELSTLNEKIKELSQRIC 476

Query: 263 YLEACVTKGETL 298
              A VT  +T+
Sbjct: 477 DTRAGVTNVKTV 488


>AE014296-524|AAF47696.2|  583|Drosophila melanogaster CG9965-PA
           protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
 Frame = +2

Query: 86  PRETIQKQIQQDWVNREYIE--VITGSIKKITDFLNSFDMSCRSSLATLNEKLTSLERKI 259
           PR  ++K    D   R      V  G +  + D   SFD+  R S  +LNE      RK 
Sbjct: 200 PRAQVKKSASGDTALRNLAAGGVGAGGLSPLNDVYQSFDVQERGSRVSLNENSVPKHRKT 259

Query: 260 DYLEA 274
            + ++
Sbjct: 260 RFQQS 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,683,397
Number of Sequences: 53049
Number of extensions: 225214
Number of successful extensions: 576
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)