Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L24
         (393 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         26   0.13 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    26   0.13 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    26   0.13 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   3.8  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   6.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   8.8  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 122 WVNREYIEVITGSIKK-ITDFLNSFDMSCRSSLATLNE 232
           ++NREYI V++  ++K + +  N  D++ R   A +NE
Sbjct: 372 YINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNE 409


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 122 WVNREYIEVITGSIKK-ITDFLNSFDMSCRSSLATLNE 232
           ++NREYI V++  ++K + +  N  D++ R   A +NE
Sbjct: 372 YINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNE 409


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 122 WVNREYIEVITGSIKK-ITDFLNSFDMSCRSSLATLNE 232
           ++NREYI V++  ++K + +  N  D++ R   A +NE
Sbjct: 372 YINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNE 409


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 387 HHFHQANMEAIL 352
           HH H AN  AIL
Sbjct: 279 HHVHHANHHAIL 290


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +1

Query: 346 HEQDCFHVCLVKMMWT 393
           H+  C+  C++K++ T
Sbjct: 63  HDLQCYTTCIMKLLRT 78


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 73  NFCNVYYKYLLINLLGS 23
           ++CN+   +L+  +LGS
Sbjct: 360 DYCNIVATHLVCGILGS 376


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,425
Number of Sequences: 438
Number of extensions: 1650
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)