Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L23
(250 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 29 0.33
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 28 0.76
Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z48009-7|CAA88083.1| 329|Caenorhabditis elegans Hypothetical pr... 27 2.3
AF040655-11|AAB95040.1| 251|Caenorhabditis elegans Hypothetical... 27 2.3
AY559748-1|AAS72410.1| 671|Caenorhabditis elegans heat shock tr... 26 4.1
AY559747-1|AAS72409.1| 671|Caenorhabditis elegans heat shock tr... 26 4.1
AL033536-5|CAA22146.1| 671|Caenorhabditis elegans Hypothetical ... 26 4.1
AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical ... 25 7.1
Z82095-3|CAB05028.1| 411|Caenorhabditis elegans Hypothetical pr... 25 9.4
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 25 9.4
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 29.5 bits (63), Expect = 0.33
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = +3
Query: 18 DRIVNNLFNYQWNVNIMDGPAHNLARKMDSGLLLFLDNESGLL---HG-YRLLKKYN--M 179
++ + Y+ V G ++ +K D G LL +D + L+ HG Y L K +
Sbjct: 552 EKTAEDFITYKGKVYFATG---DIGQKRDDGSLLIIDRKKDLVKLQHGEYVSLAKVECAL 608
Query: 180 YHSLMLDNLCVFRKNTVDSLKSL 248
+ ++DN+CV+ DS+ +L
Sbjct: 609 LNCPIVDNICVYGSGMEDSVVAL 631
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 28.3 bits (60), Expect = 0.76
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 48 QWNVNIMDGPAHNLARKMDSGLL 116
Q N ++DGPA+ LAR+ +S L+
Sbjct: 649 QTNAQLLDGPAYELARRRNSELV 671
>Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical
protein T27F6.8 protein.
Length = 301
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 78 AHNLARKMDSGLLLFLDNESGLL 146
+HNL +K SGLL F+ N LL
Sbjct: 24 SHNLLKKNSSGLLRFIRNNDKLL 46
>Z48009-7|CAA88083.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.10 protein.
Length = 329
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 31 IICSTTSGM*ILWTGQLITW 90
++CST+SG ILW L W
Sbjct: 152 LVCSTSSGFIILWDDPLEGW 171
>AF040655-11|AAB95040.1| 251|Caenorhabditis elegans Hypothetical
protein T24E12.2 protein.
Length = 251
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 42 NYQWNVNIMDGPAHNLARKMDSGLLLFLDNESGLLHGYRLLKKYNM 179
+YQW +++ + +K+ + +F+ N+S L R K YN+
Sbjct: 142 DYQWALDLTEFLFDPNGKKVVPQIKMFVRNQSSLYGNQRSTKSYNL 187
>AY559748-1|AAS72410.1| 671|Caenorhabditis elegans heat shock
transcription factor 1 protein.
Length = 671
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 81 ELARP*YSHSTGS*TNYSRFYPNSPS 4
++A+P +S G NYS F P+ PS
Sbjct: 477 QMAQPQQDYSGGFVNNYSGFMPSDPS 502
>AY559747-1|AAS72409.1| 671|Caenorhabditis elegans heat shock
transcription factor 1 protein.
Length = 671
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 81 ELARP*YSHSTGS*TNYSRFYPNSPS 4
++A+P +S G NYS F P+ PS
Sbjct: 477 QMAQPQQDYSGGFVNNYSGFMPSDPS 502
>AL033536-5|CAA22146.1| 671|Caenorhabditis elegans Hypothetical
protein Y53C10A.12 protein.
Length = 671
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 81 ELARP*YSHSTGS*TNYSRFYPNSPS 4
++A+P +S G NYS F P+ PS
Sbjct: 477 QMAQPQQDYSGGFVNNYSGFMPSDPS 502
>AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical
protein F42G8.9 protein.
Length = 386
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +3
Query: 120 FLDNESGLLHGYRLLKKYNMYHSLML----DNLCVFRKNTVDS 236
F+ + + L+HG R +KY+M +L++ DNL + + NTV+S
Sbjct: 341 FIGSTAFLIHGSRKREKYDM--ALIVKNDDDNLKLGKDNTVNS 381
>Z82095-3|CAB05028.1| 411|Caenorhabditis elegans Hypothetical
protein ZK849.5 protein.
Length = 411
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 61 ILWTGQLITWQGRWTAVYSCSWITSPGYY 147
ILW GQ+ WQ + + + +C +I P Y
Sbjct: 214 ILW-GQIKEWQTKLSLLRNCDYIPIPLAY 241
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 71 VHNIHIPLVVEQIIHDSIQIRPR 3
V+N ++P+++ Q + D +RPR
Sbjct: 936 VYNEYLPIIIGQKLIDDYDLRPR 958
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,810,704
Number of Sequences: 27780
Number of extensions: 106969
Number of successful extensions: 341
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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