Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L22
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     27   0.11 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    20   9.7  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    20   9.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    20   9.7  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 26.6 bits (56), Expect = 0.11
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 249 NSKRAKKKNRPRNVQEGHKSSSVQL*ELHSVTSW 350
           NS+R  K+  P N      SS V L +LHS+  W
Sbjct: 383 NSRREGKQLNPLNKGTEADSSFVTLPQLHSLDEW 416


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 149 DGKTFTFLNSKCEAAHLMRRNPR 217
           D   F  L+S CE  +++ R P+
Sbjct: 58  DKSIFAKLDSICEDCYMLFREPQ 80


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 149 DGKTFTFLNSKCEAAHLMRRNPR 217
           D   F  L+S CE  +++ R P+
Sbjct: 58  DKSIFAKLDSICEDCYMLFREPQ 80


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 149 DGKTFTFLNSKCEAAHLMRRNPR 217
           D   F  L+S CE  +++ R P+
Sbjct: 58  DKSIFAKLDSICEDCYMLFREPQ 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,533
Number of Sequences: 336
Number of extensions: 1963
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)