Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L19
         (349 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457391-1|CAG33672.1|  491|Homo sapiens SLC43A3 protein.              30   2.3  
BC003163-1|AAH03163.1|  491|Homo sapiens SLC43A3 protein protein.      30   2.3  
AK075552-1|BAC11695.1|  491|Homo sapiens protein ( Homo sapiens ...    30   2.3  
AB028927-1|BAB82466.1|  491|Homo sapiens FOAP-13 protein.              30   2.3  
AY358751-1|AAQ89111.1|   81|Homo sapiens RLLV1833 protein.             28   9.3  

>CR457391-1|CAG33672.1|  491|Homo sapiens SLC43A3 protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 25  SPAAGIRHEEMLINYSYSGRILGISDFILLCSQKPPSLDSENLLAFH*KLCS*LKRRPLQ 204
           +P  G+  + +   Y    R  G S   +      PSL   +LL     LC+ +   PLQ
Sbjct: 332 APWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLCLGFALCASVPILPLQ 391

Query: 205 YLTVV 219
           YLT +
Sbjct: 392 YLTFI 396


>BC003163-1|AAH03163.1|  491|Homo sapiens SLC43A3 protein protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 25  SPAAGIRHEEMLINYSYSGRILGISDFILLCSQKPPSLDSENLLAFH*KLCS*LKRRPLQ 204
           +P  G+  + +   Y    R  G S   +      PSL   +LL     LC+ +   PLQ
Sbjct: 332 APWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLCLGFALCASVPILPLQ 391

Query: 205 YLTVV 219
           YLT +
Sbjct: 392 YLTFI 396


>AK075552-1|BAC11695.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0252 fis, clone NT2RP3003258, highly similar to
           Likely ortholog of mouse embryonic epithelial gene 1. ).
          Length = 491

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 25  SPAAGIRHEEMLINYSYSGRILGISDFILLCSQKPPSLDSENLLAFH*KLCS*LKRRPLQ 204
           +P  G+  + +   Y    R  G S   +      PSL   +LL     LC+ +   PLQ
Sbjct: 332 APWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLCLGFALCASVPILPLQ 391

Query: 205 YLTVV 219
           YLT +
Sbjct: 392 YLTFI 396


>AB028927-1|BAB82466.1|  491|Homo sapiens FOAP-13 protein.
          Length = 491

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 25  SPAAGIRHEEMLINYSYSGRILGISDFILLCSQKPPSLDSENLLAFH*KLCS*LKRRPLQ 204
           +P  G+  + +   Y    R  G S   +      PSL   +LL     LC+ +   PLQ
Sbjct: 332 APWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLCLGFALCASVPILPLQ 391

Query: 205 YLTVV 219
           YLT +
Sbjct: 392 YLTFI 396


>AY358751-1|AAQ89111.1|   81|Homo sapiens RLLV1833 protein.
          Length = 81

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 112 LCSQKPPSLDSENLLAFH*KLCS*LKRRPLQYLTVV 219
           LC  + PS +S NL   H +LC   K  P   L VV
Sbjct: 39  LCCHRVPSPNSTNLKGHHVRLCKPCKLEPEPRLWVV 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,515,420
Number of Sequences: 237096
Number of extensions: 1066121
Number of successful extensions: 1428
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)