Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L16
         (328 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q75D47 Cluster: ABR176Cp; n=1; Eremothecium gossypii|Re...    32   2.8  
UniRef50_UPI0000498C69 Cluster: hypothetical protein 422.t00002;...    31   6.5  
UniRef50_Q58LL7 Cluster: Gp9; n=2; Myoviridae|Rep: Gp9 - Cyanoph...    31   6.5  
UniRef50_A6BFA8 Cluster: Putative uncharacterized protein; n=2; ...    30   8.6  
UniRef50_A1SXS8 Cluster: Uncharacterized proteins involved in st...    30   8.6  

>UniRef50_Q75D47 Cluster: ABR176Cp; n=1; Eremothecium gossypii|Rep:
           ABR176Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 701

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +3

Query: 117 LRLYPSKIKHGKN---NYSYNTRLLWQY*MDCYRTVYLTDQI 233
           +RL+ SK+  GK    +YS+ T+ LWQ+ MDC   +Y  + I
Sbjct: 287 VRLFESKM-FGKKVLIDYSFTTKALWQWLMDCTDIMYPKEAI 327


>UniRef50_UPI0000498C69 Cluster: hypothetical protein 422.t00002;
           n=5; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 422.t00002 - Entamoeba histolytica HM-1:IMSS
          Length = 507

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 11/37 (29%), Positives = 24/37 (64%)
 Frame = +1

Query: 217 ISQIRLVTSKPNIMTGTQDAINYNQLYLREVLTPEIF 327
           + ++  +T++  +M    D +N++Q Y+R VL PE++
Sbjct: 384 VDKLNDLTNQHKLMDDDLDQLNFSQQYIRSVLPPELW 420


>UniRef50_Q58LL7 Cluster: Gp9; n=2; Myoviridae|Rep: Gp9 - Cyanophage
           P-SSM4
          Length = 409

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = +1

Query: 4   TKGNKSGAPRGGGALNSGSPGXCRXFFGTKGS*STPVC*DFIRQK*NMAKITTAITLASF 183
           + GN + AP G G+L  G       F GT GS + P     ++ K   A +  A   AS+
Sbjct: 87  SNGNIALAPNGTGSLTIGHGSITSTFSGTDGSVNLPTT---VKYKNEYASLAAAPAAASY 143

Query: 184 GSIEWTV 204
               +TV
Sbjct: 144 TGYFFTV 150


>UniRef50_A6BFA8 Cluster: Putative uncharacterized protein; n=2;
           Clostridiales|Rep: Putative uncharacterized protein -
           Dorea longicatena DSM 13814
          Length = 349

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 147 GKNNYSYNTRLLWQY*MDCYRTVYLTDQIGD 239
           GK NY    + L Q   DC R +YLTD+  D
Sbjct: 273 GKYNYMQTDKTLEQMYRDCLRKLYLTDKRND 303


>UniRef50_A1SXS8 Cluster: Uncharacterized proteins involved in
           stress response; n=1; Psychromonas ingrahamii 37|Rep:
           Uncharacterized proteins involved in stress response -
           Psychromonas ingrahamii (strain 37)
          Length = 398

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -3

Query: 251 LGFEVTNLICEIHCTVTVHSILPKEASVIAVVIFAMFY 138
           +GF   NL  EIHC  TV  + P+  S    +I A  Y
Sbjct: 104 IGFSDLNLTAEIHCNGTVTLLTPQAFSTEKGIIVAEIY 141


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,124,767
Number of Sequences: 1657284
Number of extensions: 5804697
Number of successful extensions: 16057
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16048
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)