Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L16
(328 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 1.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 1.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 1.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 1.4
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 22 1.4
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 21 2.5
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 2.5
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 2.5
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 21 2.5
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 21 2.5
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 2.5
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 20 5.7
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 1.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 257 IILGFEVTNLICEIHCTVTVHSILPKEASVIAVVIFAMFYF*RIKSQQTGVL*LPFV 87
++ G +TN IC + + + S KE+ VI +F I +Q TG + P +
Sbjct: 194 VVKGAMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLF---AIAAQATGFVVWPII 247
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 1.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 257 IILGFEVTNLICEIHCTVTVHSILPKEASVIAVVIFAMFYF*RIKSQQTGVL*LPFV 87
++ G +TN IC + + + S KE+ VI +F I +Q TG + P +
Sbjct: 194 VVKGAMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLF---AIAAQATGFVVWPII 247
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 1.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 257 IILGFEVTNLICEIHCTVTVHSILPKEASVIAVVIFAMFYF*RIKSQQTGVL*LPFV 87
++ G +TN IC + + + S KE+ VI +F I +Q TG + P +
Sbjct: 194 VVKGAMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLF---AIAAQATGFVVWPII 247
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 1.4
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 257 IILGFEVTNLICEIHCTVTVHSILPKEASVIAVVIFAMFYF*RIKSQQTGVL*LPFV 87
++ G +TN IC + + + S KE+ VI +F I +Q TG + P +
Sbjct: 194 VVKGAMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLF---AIAAQATGFVVWPII 247
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 22.2 bits (45), Expect = 1.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 37 GGALNSGSPGXCRXFFGTKGS 99
GG N+G+PG F+G G+
Sbjct: 187 GGNNNNGTPGGHSGFWGQLGA 207
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 21.4 bits (43), Expect = 2.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 55 HYLERRHRVEL 23
HYL RR R+E+
Sbjct: 29 HYLTRRRRIEI 39
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 2.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 55 HYLERRHRVEL 23
HYL RR R+E+
Sbjct: 246 HYLTRRRRIEM 256
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.4 bits (43), Expect = 2.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 22 GAPRGGGALNSGSPG 66
GA G LNSG PG
Sbjct: 46 GASFGSSMLNSGMPG 60
Score = 20.2 bits (40), Expect = 5.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 99 LEHARLLRLYPSKIKHGKNNYSY 167
L+ AR + Y H K YSY
Sbjct: 123 LQRARADKTYRRSYTHAKPPYSY 145
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 21.4 bits (43), Expect = 2.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 55 HYLERRHRVEL 23
HYL RR R+E+
Sbjct: 28 HYLTRRRRIEM 38
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.4 bits (43), Expect = 2.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 55 HYLERRHRVEL 23
HYL RR R+E+
Sbjct: 180 HYLTRRRRIEI 190
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.4 bits (43), Expect = 2.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 55 HYLERRHRVEL 23
HYL RR R+E+
Sbjct: 239 HYLTRRRRIEI 249
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 20.2 bits (40), Expect = 5.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 198 DCYRTVYLTDQIGDLKAQYY 257
D YR VY Q +L+ ++Y
Sbjct: 157 DKYRVVYTDHQRVELEKEFY 176
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,866
Number of Sequences: 336
Number of extensions: 1443
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6261139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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