Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L16
         (328 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   0.96 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   5.1  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    21   8.9  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    21   8.9  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    21   8.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 10  GNKSGAPRGGGALNSGSPG 66
           G+  GAP GGG  +SG PG
Sbjct: 206 GSGGGAPGGGGG-SSGGPG 223


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
 Frame = -3

Query: 86 PKXF--LQXPGDPLFRAPP 36
          PK F  LQ PG  L +APP
Sbjct: 4  PKQFYSLQLPGKSLTKAPP 22


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 55  HYLERRHRVEL 23
           HYL RR R+E+
Sbjct: 161 HYLTRRRRIEI 171


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 55  HYLERRHRVEL 23
           HYL RR R+E+
Sbjct: 242 HYLTRRRRIEM 252


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 55  HYLERRHRVEL 23
           HYL RR R+E+
Sbjct: 259 HYLTRRRRIEM 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,618
Number of Sequences: 2352
Number of extensions: 6671
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)