Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L16
         (328 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061324-1|AAL28872.1|  456|Drosophila melanogaster LD23965p pro...    28   3.2  
AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-lik...    28   3.2  
AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-lik...    28   3.2  
AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,...    28   3.2  
AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,...    28   3.2  
AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,...    28   3.2  

>AY061324-1|AAL28872.1|  456|Drosophila melanogaster LD23965p
           protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 1   LTKGNKSGAPRGGGALNSGSPG 66
           +++GN+SG  RGGG    G+PG
Sbjct: 388 VSRGNRSGGDRGGGG-GDGAPG 408


>AF197345-1|AAF07212.1| 1013|Drosophila melanogaster prominin-like
            protein protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 1    LTKGNKSGAPRGGGALNSGSPG 66
            +++GN+SG  RGGG    G+PG
Sbjct: 945  VSRGNRSGGDRGGGG-GDGAPG 965


>AF127935-1|AAD22487.2| 1013|Drosophila melanogaster prominin-like
            protein protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 1    LTKGNKSGAPRGGGALNSGSPG 66
            +++GN+SG  RGGG    G+PG
Sbjct: 945  VSRGNRSGGDRGGGG-GDGAPG 965


>AE014296-563|AAN11531.1| 1013|Drosophila melanogaster CG7740-PC,
            isoform C protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 1    LTKGNKSGAPRGGGALNSGSPG 66
            +++GN+SG  RGGG    G+PG
Sbjct: 945  VSRGNRSGGDRGGGG-GDGAPG 965


>AE014296-562|AAN11530.1| 1013|Drosophila melanogaster CG7740-PB,
            isoform B protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 1    LTKGNKSGAPRGGGALNSGSPG 66
            +++GN+SG  RGGG    G+PG
Sbjct: 945  VSRGNRSGGDRGGGG-GDGAPG 965


>AE014296-561|AAF47716.2| 1013|Drosophila melanogaster CG7740-PA,
            isoform A protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 1    LTKGNKSGAPRGGGALNSGSPG 66
            +++GN+SG  RGGG    G+PG
Sbjct: 945  VSRGNRSGGDRGGGG-GDGAPG 965


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,643,233
Number of Sequences: 53049
Number of extensions: 274705
Number of successful extensions: 1116
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)