Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L14
(233 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B9.08c |||Mago-nashi homolog|Schizosaccharomyces pombe|chr ... 91 1e-20
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 27 0.25
SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr 1|||M... 25 1.3
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 24 2.3
SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA synthase|Sc... 24 3.1
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 24 3.1
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 24 3.1
SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces pom... 24 3.1
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 23 5.4
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 23 5.4
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 23 5.4
SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 23 7.1
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 23 7.1
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 23 7.1
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 23 7.1
SPBP8B7.08c |||leucine carboxyl methyltransferase |Schizosacchar... 23 7.1
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 22 9.4
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 22 9.4
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 22 9.4
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 22 9.4
SPCC663.10 |||methyltransferase, DUF1613 family |Schizosaccharom... 22 9.4
>SPBC3B9.08c |||Mago-nashi homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 147
Score = 91.5 bits (217), Expect = 1e-20
Identities = 36/58 (62%), Positives = 48/58 (82%)
Frame = +3
Query: 60 TDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAYVHPCVMEEL 233
+DFY+RYY GH G+FGHEFLEF++ DG RYANNSNY+ND++IRKE +V V++E+
Sbjct: 2 SDFYVRYYSGHHGRFGHEFLEFDYHSDGLARYANNSNYRNDSLIRKEMFVSELVLKEV 59
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 0.25
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 81 YVGHKGKFGHEFLEFEFRPD-GKLRYANNSNYKNDTMIR 194
+V KG F H LEF PD G ANN +N +++
Sbjct: 13 WVKSKGAFVHPSLEFSVIPDAGSCVLANNDINENTVLLK 51
>SPAC3F10.07c |mug91||dubious|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 43 HKKRCRQISIYVITWATKANL 105
H+KR I +Y++ +AT+ NL
Sbjct: 80 HRKRIGAIDLYILDFATQHNL 100
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 24.2 bits (50), Expect = 2.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 108 GQICLCGPRNNVYRNLSTSFFMK 40
GQ+C+C R V++N+ F K
Sbjct: 295 GQVCVCPNRVYVHKNVYDEFVSK 317
>SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA
synthase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 447
Score = 23.8 bits (49), Expect = 3.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 1 ARGVGNLKVSGCIFHKKRCRQI 66
++G+G + CIFH C+Q+
Sbjct: 236 SQGLGLDRFDYCIFHAPTCKQV 257
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 23.8 bits (49), Expect = 3.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 96 GKFGHEFLEFEFRPDGKLRYANNSNYKN 179
GKFG F +FEF + R + KN
Sbjct: 799 GKFGEAFKKFEFGGEKMSRRRKSETKKN 826
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 23.8 bits (49), Expect = 3.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 48 KKMSTDFYIRYYVGHKGKFGHEFLE 122
KK ++Y RY + K + G+E +E
Sbjct: 565 KKSEDEYYSRYLMDRKNESGYEPIE 589
>SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 23.8 bits (49), Expect = 3.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 39 FS*KKMSTDFYIRYYVGHKGKFGHEFLEFEFRPDGKL 149
FS K+ T+FY + +G ++ + + PD KL
Sbjct: 250 FSAHKVPTEFYYSFSIGINSRYKNFIQTLKGVPDDKL 286
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 23.0 bits (47), Expect = 5.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 111 EFLEFEFRPDGKLRYANNSNYKNDTMI 191
EF F+ PD L+YA+ S + T I
Sbjct: 254 EFSRFDREPDRYLKYASESITGHSTTI 280
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/40 (20%), Positives = 20/40 (50%)
Frame = -3
Query: 183 CHFCNLNYWHTVVYHPAEIRILEIHGQICLCGPRNNVYRN 64
C ++ +W + Y P ++I+++ +I +N+ N
Sbjct: 269 CLLPSVTFWQNICYPPIFVKIVDVSLKILFNWDLSNISLN 308
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 126 EFRPDGKLRYANNSNYKNDTMIR--KEAYVHPCV 221
E GK+RY SN+ N+ + R K A V P +
Sbjct: 153 ELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTI 186
>SPAC31G5.15 |||phosphatidylserine decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 980
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 99 CLCGPRNNVYRNLSTSFFMK 40
CL G +N + S SF+MK
Sbjct: 50 CLSGDESNDSKKSSASFYMK 69
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 22.6 bits (46), Expect = 7.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 96 GKFGHEFLEFEFRPDGKLRYANN 164
GK GH E + DG+L Y N
Sbjct: 141 GKIGHRSFECQQASDGQLCYKCN 163
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 22.6 bits (46), Expect = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 186 LCHFCNLNYWHTVVY 142
+C CN NY+ V+Y
Sbjct: 323 ICMSCNQNYFRNVLY 337
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 22.6 bits (46), Expect = 7.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -3
Query: 183 CHFCNLNYWHT 151
CH NLN W T
Sbjct: 777 CHLVNLNKWET 787
>SPBP8B7.08c |||leucine carboxyl methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 310
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 60 TDFYIRYYVGHKGKFGHEFLEFEFRPD 140
TD + Y+ G +F+EF+F P+
Sbjct: 78 TDTRVFRYISEYGPENLKFIEFDFYPN 104
>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 527
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 186 LCHFCNLNYWHTVVYHPAEIRI 121
L ++C+ NY H + A+I I
Sbjct: 268 LSYYCSHNYQHLIENESADINI 289
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 22.2 bits (45), Expect = 9.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 163 LLAYRSLPSGRNSNSRNSWPNLPLWPT 83
L Y LPS +N +S + P WPT
Sbjct: 1150 LYEYMLLPSEKNESSCLTKPMNKEWPT 1176
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 210 ERTLPYVSLCHFCNL 166
E+ L YVS+C F N+
Sbjct: 664 EKLLEYVSVCFFINV 678
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 22.2 bits (45), Expect = 9.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 72 IRYYVGHKGKFGHEFLE 122
+RY + KGKF H+ L+
Sbjct: 369 LRYMMECKGKFSHKMLK 385
>SPCC663.10 |||methyltransferase, DUF1613 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 502
Score = 22.2 bits (45), Expect = 9.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 136 GRNSNSRNSWPNLPLW 89
G ++ R SW PLW
Sbjct: 302 GFDARKRKSWETYPLW 317
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 968,765
Number of Sequences: 5004
Number of extensions: 16702
Number of successful extensions: 47
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 2,362,478
effective HSP length: 57
effective length of database: 2,077,250
effective search space used: 41545000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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