Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L14
         (233 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   0.49 
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   0.49 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   0.65 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   0.65 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   0.65 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   0.65 
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   0.86 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   2.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   3.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   3.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   3.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    20   4.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    19   6.0  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    19   6.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   8.0  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    19   8.0  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    19   8.0  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    19   8.0  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    19   8.0  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    19   8.0  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    19   8.0  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    19   8.0  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    19   8.0  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    19   8.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   8.0  

>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 0.49
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 3   TRSR*SKSKRLHFS*KKMSTDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKN 179
           +R R S+S+    +  K   + Y +Y    KG+   +  E E   + K+  +NN NYKN
Sbjct: 257 SRKRYSRSREREQNSYKNERE-YRKYRETSKGR-SRDRTERERSKETKIISSNNYNYKN 313


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 0.49
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 3   TRSR*SKSKRLHFS*KKMSTDFYIRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKN 179
           +R R S+S+    +  K   + Y +Y    KG+   +  E E   + K+  +NN NYKN
Sbjct: 268 SRKRYSRSREREQNSYKNERE-YRKYRETSKGR-SRDRTERERSKETKIISSNNYNYKN 324


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 99  KFGHEFLEFEFRPDGKLRYANNSNYK 176
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 99  KFGHEFLEFEFRPDGKLRYANNSNYK 176
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 99  KFGHEFLEFEFRPDGKLRYANNSNYK 176
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 157 KYEVEFLLQQQWYDPRLRYSNRSQYE 182


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 0.65
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 99  KFGHEFLEFEFRPDGKLRYANNSNYK 176
           K+  EFL  +   D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 0.86
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 156 ANNSNYKNDTMIRKEAYVHPCVMEEL 233
           +N SNY ND    K+ Y +   +E++
Sbjct: 91  SNISNYNNDNNYNKKLYYNINYIEQI 116


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 192 VSLCHFCNLNYWHTVVYHPAEIRILEIHGQICLCGPR-NNVYRNLSTSF 49
           + +  FC    WH VV    E+  L + G + + G   N + R +ST F
Sbjct: 286 MGVASFCKAFPWHFVVDRQLELVQLGV-GFMRIFGHHLNRLGREISTYF 333


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 70  IYVITWATKANLAMN 114
           +Y ITW    N A+N
Sbjct: 363 VYFITWLGYVNSALN 377


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 70  IYVITWATKANLAMN 114
           +Y ITW    N A+N
Sbjct: 363 VYFITWLGYVNSALN 377


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 70  IYVITWATKANLAMN 114
           +Y ITW    N A+N
Sbjct: 363 VYFITWLGYVNSALN 377


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 203 VRSPLRYGR 229
           ++ PLRYGR
Sbjct: 127 IKDPLRYGR 135


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 159 NNSNYKNDTMIRKEAY 206
           NN+NY N+   +K  Y
Sbjct: 99  NNNNYNNNNYNKKLYY 114


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 159 NNSNYKNDTMIRKEAY 206
           NN+NY N+   +K  Y
Sbjct: 99  NNNNYNNNNYNKKLYY 114


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 69  YIRYYVGHKGK 101
           Y  YY+ H GK
Sbjct: 142 YNNYYIWHPGK 152


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 153 YANNSNYKN 179
           Y NN+NY N
Sbjct: 97  YNNNNNYNN 105


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 159 NNSNYKN 179
           NN+NYKN
Sbjct: 325 NNNNYKN 331


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 69  YIRYYVGHKGK 101
           Y  YY+ H GK
Sbjct: 142 YNNYYIWHPGK 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,060
Number of Sequences: 438
Number of extensions: 1406
Number of successful extensions: 34
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3772710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)