Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L09
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    26   0.44 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   5.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.4  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    22   7.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    22   9.5  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    22   9.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    22   9.5  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 73  MVFFCFFAATIMIAVFYSDPHSLV 2
           ++ F FF     IAV +S PH +V
Sbjct: 509 LIIFTFFTIVATIAVLFSAPHIIV 532


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 2   HEAVRITVENCYHNG 46
           H+AV +T+E  YH G
Sbjct: 238 HQAVNLTIEANYHFG 252


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 284 RYCLRKILQSMYSSNHRPWRF*HHNNIA*GNSLDL 388
           RY   ++L+S + S+HR  RF   ++   GN + L
Sbjct: 183 RYNTWEVLKSYWYSDHRYVRFSVDSSSVLGNGIQL 217


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 54  KKQKKTIESINSRLALVMK--SGKYCLGY 134
           +  K T+ES+ S+LAL +   +  Y LG+
Sbjct: 152 RDDKATLESMGSQLALALANLTANYQLGF 180


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1

Query: 259 WWTPVLAR 236
           WW+P+LAR
Sbjct: 345 WWSPLLAR 352


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 282 LGTACGKYYRVCTLA 326
           LGT  GK Y  C LA
Sbjct: 14  LGTCSGKIYNRCELA 28


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 94  WLWL*SLANTAWATNKL 144
           WLWL  L +  W T  L
Sbjct: 119 WLWLLWLLSQTWITRHL 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,706
Number of Sequences: 2352
Number of extensions: 8552
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)