Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L08
         (267 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4X3N4 Cluster: Putative uncharacterized protein; n=1; ...    34   0.54 
UniRef50_Q7R9J7 Cluster: Putative uncharacterized protein PY0686...    32   2.2  

>UniRef50_Q4X3N4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 223

 Score = 34.3 bits (75), Expect = 0.54
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 265 YYHCN-NIANIHLHYYNTIISYSRTKIIFYFYYLFIS 158
           Y+H N ++ N H +Y N I       I+FYFY+ F++
Sbjct: 119 YFHFNYSLFNQHTNYINNIFRNELMNILFYFYHQFVN 155


>UniRef50_Q7R9J7 Cluster: Putative uncharacterized protein PY06865;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06865 - Plasmodium yoelii
           yoelii
          Length = 706

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -3

Query: 241 NIHLHYYNTIISYSRTKIIFYFYYLFISKN*ISLIY*SVRVADVPMASM-ATLTSKNLNI 65
           N+ +H+ N  I+YSR  + F F +LF+ ++ I  I+  + +    + S    + + N NI
Sbjct: 571 NMMIHFCNYFINYSRLFVSFLFLFLFLYEDIIIYIFKYISIHKNKINSQKININACNNNI 630

Query: 64  Y 62
           Y
Sbjct: 631 Y 631


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,089,013
Number of Sequences: 1657284
Number of extensions: 2396341
Number of successful extensions: 5013
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5010
length of database: 575,637,011
effective HSP length: 66
effective length of database: 466,256,267
effective search space used: 10257637874
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)