Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L07
(396 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 166 2e-40
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 134 6e-31
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 130 1e-29
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 109 2e-23
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 103 2e-21
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 99 3e-20
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 92 3e-18
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 90 2e-17
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 85 6e-16
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 84 8e-16
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 80 2e-14
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 77 9e-14
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 74 9e-13
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 72 4e-12
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 71 6e-12
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 70 2e-11
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 68 8e-11
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 66 2e-10
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 66 3e-10
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 65 5e-10
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 1e-09
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 63 2e-09
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 61 7e-09
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 59 4e-08
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 59 4e-08
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 53 2e-06
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 50 2e-05
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 47 1e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 45 5e-04
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 42 0.003
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 39 0.040
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 36 0.22
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 0.38
UniRef50_Q5VWK0 Cluster: Neuroblastoma breakpoint family member ... 35 0.66
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 34 0.87
UniRef50_Q4YNL2 Cluster: Putative uncharacterized protein; n=1; ... 33 1.5
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 33 2.7
UniRef50_Q46IU7 Cluster: Putative uncharacterized protein; n=2; ... 32 3.5
UniRef50_A4AME9 Cluster: FKBP-type peptidyl-prolyl cis-transisom... 32 3.5
UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2; ... 32 4.6
UniRef50_A5G467 Cluster: Putative uncharacterized protein precur... 32 4.6
UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.6
UniRef50_A3BJ10 Cluster: Putative uncharacterized protein; n=1; ... 32 4.6
UniRef50_A7ANM9 Cluster: ATP-dependent protease La family protei... 32 4.6
UniRef50_Q4SLL1 Cluster: Chromosome 15 SCAF14556, whole genome s... 31 6.1
UniRef50_A6E7Z1 Cluster: Membrane protein; n=2; Bacteria|Rep: Me... 31 6.1
UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2; ... 31 6.1
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 8.1
UniRef50_Q4N5C9 Cluster: ATP-dependent protease, putative; n=2; ... 31 8.1
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 166 bits (403), Expect = 2e-40
Identities = 84/110 (76%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
Frame = +1
Query: 28 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIK-IRPARLKGIQTKHSKFVRDLVREVVG 204
MA R+E+AIGL KGHKT+KI K DK +K +R +RLK IQT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 205 HAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
HA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+LTQ+RK
Sbjct: 60 HAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 134 bits (324), Expect = 6e-31
Identities = 70/109 (64%), Positives = 82/109 (75%)
Frame = +1
Query: 28 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 207
MA R+ +A+GL KGHK TK K R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 208 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVL MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 130 bits (314), Expect = 1e-29
Identities = 62/77 (80%), Positives = 67/77 (87%)
Frame = +1
Query: 124 KIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 303
+ P RLKGIQTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 304 AKRKREELSNVLTQMRK 354
AKRKREELSN+LTQM K
Sbjct: 63 AKRKREELSNILTQMGK 79
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 109 bits (262), Expect = 2e-23
Identities = 55/103 (53%), Positives = 72/103 (69%)
Frame = +1
Query: 46 IAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKR 225
+A+GL KGH T++ +K R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 226 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
+E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 103 bits (246), Expect = 2e-21
Identities = 55/106 (51%), Positives = 69/106 (65%)
Frame = +1
Query: 34 PRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQ 213
P+ + +G+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 214 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 351
YEKR ELLKV KDKRALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 56 YEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 99.1 bits (236), Expect = 3e-20
Identities = 54/100 (54%), Positives = 66/100 (66%)
Frame = +1
Query: 52 IGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAM 231
+GL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 232 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 351
ELLKV KDKRALK KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 92.3 bits (219), Expect = 3e-18
Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Frame = +1
Query: 16 QSEIMAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVRE 195
+ +I APR IA+GL KGH TT I K +RP+R KG++TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 196 VVGHAQYEKRAMELLK---VSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
V G A YE+ +EL+K S KRALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 58 VCGFAPYERHMIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 89.8 bits (213), Expect = 2e-17
Identities = 50/112 (44%), Positives = 67/112 (59%)
Frame = +1
Query: 19 SEIMAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREV 198
S A R + G+ KG TT I RP+ KG++T+ FVR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142
Query: 199 VGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
G + YEKR MELL+ SKDK+A K K+RLGT +R+KRK EELS V+ + R+
Sbjct: 143 AGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 84.6 bits (200), Expect = 6e-16
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +1
Query: 100 KGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 279
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 280 RRLGTHIRAKRKREELSNVLTQMR 351
+RLGT RAK K EEL++V+ R
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 84.2 bits (199), Expect = 8e-16
Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +1
Query: 97 KKG-ITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKF 273
KKG I +K ++ + K Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF
Sbjct: 9 KKGHIVNKRTPLKRRQSKP-QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKF 67
Query: 274 LKRRLGTHIRAKRKREELSNVLTQMR 351
K+RLGTH+RAKRKRE+++ L R
Sbjct: 68 AKKRLGTHLRAKRKREQMAEALRSKR 93
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 79.8 bits (188), Expect = 2e-14
Identities = 50/109 (45%), Positives = 64/109 (58%)
Frame = +1
Query: 28 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 207
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 208 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
Y+ + L KVS DK A KF+K+R+G HI KRK EELS V+ MRK
Sbjct: 51 MSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 77.4 bits (182), Expect = 9e-14
Identities = 45/109 (41%), Positives = 66/109 (60%)
Frame = +1
Query: 28 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 207
M + IAIGL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 208 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
+ YE+R ++L++ S +KRA K K+RLG+ RAK K EE++N++ R+
Sbjct: 51 SPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 74.1 bits (174), Expect = 9e-13
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +1
Query: 34 PRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQ 213
P IA+G GH TK S KK I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSVP-----------KNKDLINDVVREIAGFSP 56
Query: 214 YEKRAMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
YEKR +EL+KV KR+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 57 YEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 72.1 bits (169), Expect = 4e-12
Identities = 32/46 (69%), Positives = 41/46 (89%)
Frame = +1
Query: 217 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSNVL +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 71.3 bits (167), Expect = 6e-12
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +1
Query: 85 ISAGKKGITDKAIKIRPARLKGIQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 261
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 262 ALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
ALKF+++ LGTHI AKRK ELSNVL R+
Sbjct: 75 ALKFIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 69.7 bits (163), Expect = 2e-11
Identities = 41/96 (42%), Positives = 55/96 (57%)
Frame = +1
Query: 34 PRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQ 213
P + +GL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 214 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 321
YEKR ELLKV KDKRALK + ++G H + ++ E
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 67.7 bits (158), Expect = 8e-11
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +1
Query: 157 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 327
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 328 SNVLTQMRK 354
V+ R+
Sbjct: 116 QKVVILQRR 124
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 66.5 bits (155), Expect = 2e-10
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = +1
Query: 37 RFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 216
R IA+GL +G T+ + T K ++ RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 217 EKRAMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
EKR +EL K + KD K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 56 EKRIIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 65.7 bits (153), Expect = 3e-10
Identities = 40/111 (36%), Positives = 60/111 (54%)
Frame = +1
Query: 22 EIMAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVV 201
E PR I G KG+KTT+ A + D+ + K + V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 202 GHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
G + E+R ELL+V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 57 GFSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 64.9 bits (151), Expect = 5e-10
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +1
Query: 145 KGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 324
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 325 LSNV 336
++N+
Sbjct: 95 IANI 98
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 1e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +1
Query: 238 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 333
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 63.3 bits (147), Expect = 2e-09
Identities = 37/107 (34%), Positives = 55/107 (51%)
Frame = +1
Query: 34 PRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQ 213
PR I G KGH TT+ + + P + KH + V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55
Query: 214 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMRK 354
EKR E L+V K+KRALK+ K+RLG AK+KR ++ L K
Sbjct: 56 LEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 61.3 bits (142), Expect = 7e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +1
Query: 163 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 330
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 58.8 bits (136), Expect = 4e-08
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 76 TTKISAGKKGITDKAIKIRPARLKG---IQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 246
T + G K + I+ R RL IQTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 247 SKDKRALKFLKRRLGTHIRA 306
+DK AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 58.8 bits (136), Expect = 4e-08
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 127 IRPARLKGIQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 300
+ P R G+ + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 301 RAKRKREELSNVLTQ 345
RA +K L V+ +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 52.8 bits (121), Expect = 2e-06
Identities = 32/67 (47%), Positives = 40/67 (59%)
Frame = +1
Query: 46 IAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKR 225
+AIGL KG + TK A K+R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 226 AMELLKV 246
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 49.6 bits (113), Expect = 2e-05
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 112 DKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 261
+K K+R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 47.2 bits (107), Expect = 1e-04
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 154 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 330
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 331 NVLTQ 345
+L +
Sbjct: 102 RMLLE 106
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 45.2 bits (102), Expect = 5e-04
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1
Query: 244 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQMR 351
V+K + L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 42.3 bits (95), Expect = 0.003
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +1
Query: 157 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 336
TK V D++RE G YE+ M+LL+ DK+AL + K+ + + E SNV
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 337 LTQMRK 354
L + K
Sbjct: 85 LLEAIK 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 38.7 bits (86), Expect = 0.040
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 154 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 330
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K + ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 331 NVL 339
++L
Sbjct: 69 HIL 71
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 36.3 bits (80), Expect = 0.22
Identities = 28/94 (29%), Positives = 47/94 (50%)
Frame = +1
Query: 64 KGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLK 243
K KT + + GK+ I D ++ + K + K+ R+LV + +AME ++
Sbjct: 50 KWTKTHRAARGKEMIVDSSLVLSQFAKK--RNTPVKYDRNLVAATI-------KAMERVE 100
Query: 244 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLTQ 345
+ +R F KRRLG + +RKREE V+ +
Sbjct: 101 EIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.5 bits (78), Expect = 0.38
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 160 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 327
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_Q5VWK0 Cluster: Neuroblastoma breakpoint family member 6;
n=16; Catarrhini|Rep: Neuroblastoma breakpoint family
member 6 - Homo sapiens (Human)
Length = 638
Score = 34.7 bits (76), Expect = 0.66
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 273 LEASPRHTHPREEEA*RAQQRTNTD--EEGGRTPSPPRHH 386
L H H EEEA D EE G+ P PPRHH
Sbjct: 242 LVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHH 281
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.3 bits (75), Expect = 0.87
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 28 MAPRFEIAIGLRKGHKTTK 84
MAP+ E+A+GL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_Q4YNL2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 96
Score = 33.5 bits (73), Expect = 1.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 336 YVAELFTLPLRADVCAEATLQELKGALIFRYFEQFHCPLLILCVPNNFTNQIADKLRVF 160
++ LF LP D+C T ++ + F YFE LI + N +N I L +F
Sbjct: 37 HIYNLFLLPKVKDICISPTFNLIETIMQFLYFENIVYIFLISRLANQVSNSIIVMLHLF 95
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 32.7 bits (71), Expect = 2.7
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 136 ARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 303
ARL+ ++T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 304 AKRKREEL 327
A+R REEL
Sbjct: 592 AERLREEL 599
>UniRef50_Q46IU7 Cluster: Putative uncharacterized protein; n=2;
Prochlorococcus marinus|Rep: Putative uncharacterized
protein - Prochlorococcus marinus (strain NATL2A)
Length = 281
Score = 32.3 bits (70), Expect = 3.5
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +1
Query: 49 AIGLRKGHKTTKISAGKKGITDK-AIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKR 225
A+ +K K +A KK +TDK A + A + K D A K+
Sbjct: 150 ALADKKAAADKKAAADKKALTDKKAAAAKKALAEKKAAADKKAAADKKALADKKAAAAKK 209
Query: 226 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLT 342
A+ K + DK+A K T + +++KR+ + +LT
Sbjct: 210 ALAEKKAAADKKAQARKKVNSPTQVNSQQKRDSRTELLT 248
>UniRef50_A4AME9 Cluster: FKBP-type peptidyl-prolyl
cis-transisomerase; n=11; Bacteroidetes|Rep: FKBP-type
peptidyl-prolyl cis-transisomerase - Flavobacteriales
bacterium HTCC2170
Length = 462
Score = 32.3 bits (70), Expect = 3.5
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Frame = +1
Query: 28 MAPRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGH 207
+AP FE+++ +K KI A KK + D+ ++I+ K + K +++
Sbjct: 135 LAPSFEVSLKTKKSLTHYKIVADKKMVNDQVLRIQKQYGKLVSKKEIGKDFEVLGTFANE 194
Query: 208 AQ--YEKRAMELLKVSKDKRALK-FLKRRLGTHIRAKRK 315
A+ K +EL ++ K K+AL L +++G + K K
Sbjct: 195 AEEIENKTTLELDQI-KSKKALDILLGKKVGDIVSLKTK 232
>UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2;
Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
repeat - Nostoc punctiforme PCC 73102
Length = 1174
Score = 31.9 bits (69), Expect = 4.6
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +1
Query: 16 QSEIM--APRFEIAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLV 189
Q+EI+ P E+ L + + G+T + + + + IQT + +R +
Sbjct: 368 QTEILPQVPWRELLEALESLKGRSLVETAATGLTQQPVIMEYVTEQFIQTIEREMIRGEL 427
Query: 190 REVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE-LSNVLTQMR 351
HA E + + ++ ++ + L L RL TH + + EE L +L Q+R
Sbjct: 428 NLFKNHALIEAQTQDYVREAQIQFILHPLVERLFTHFDTQAQLEEQLCKILAQLR 482
>UniRef50_A5G467 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
Putative uncharacterized protein precursor - Geobacter
uraniumreducens Rf4
Length = 167
Score = 31.9 bits (69), Expect = 4.6
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 91 AGKKGITDKAI-KIRPARLKGIQTKHSKFVRDL-VREVVGHAQYEKRAMELLKVSKDKRA 264
A K G+TD I K++P + +Q KH++F DL + E+ E + +L K S +
Sbjct: 57 ADKMGLTDDQIMKMKPLH-REMQKKHARFKADLKIAEIELMEIMEVKDFDLEKASSAVKK 115
Query: 265 LKFLKRRLGTHIRAKRKREELSNVLT 342
++ +K H+ + +E+ +LT
Sbjct: 116 IEEIK--TAHHLEMLKAMKEMRTILT 139
>UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 292
Score = 31.9 bits (69), Expect = 4.6
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +1
Query: 103 GITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 282
G D+ I+ R ++KG+ TK+SK ++LV + A++ LKV K K LK ++
Sbjct: 55 GQLDRVIQERETQVKGLTTKNSKRKQELVEAI--------NALKGLKVEKQK-LLKNVQT 105
Query: 283 RLGTHIRAKRKREELSNVLTQMRK 354
H R+ +L++ + ++RK
Sbjct: 106 LKREHNINLRRITDLNSKIVKLRK 129
>UniRef50_A3BJ10 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 362
Score = 31.9 bits (69), Expect = 4.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 137 AGLILMALSVIPFLPADIFVVLWPF 63
AGL+ AL VIP LP + +V WPF
Sbjct: 71 AGLLYFALVVIPALPGVLRLVAWPF 95
>UniRef50_A7ANM9 Cluster: ATP-dependent protease La family protein;
n=1; Babesia bovis|Rep: ATP-dependent protease La family
protein - Babesia bovis
Length = 1122
Score = 31.9 bits (69), Expect = 4.6
Identities = 17/74 (22%), Positives = 35/74 (47%)
Frame = +1
Query: 133 PARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKR 312
P+R+ + S RD ++ ++ +KR +L+V++ ++ + T I K
Sbjct: 441 PSRIADLIAGISMAKRDQLQAILAEVNLDKRLAMVLEVARTDLEFAKVQAEVKTQIEEKM 500
Query: 313 KREELSNVLTQMRK 354
RE+ +LT+ K
Sbjct: 501 SREQRKYILTEQMK 514
>UniRef50_Q4SLL1 Cluster: Chromosome 15 SCAF14556, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14556, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1809
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 HTHPRE-EEA*RAQQRTNTDEEGGRTPSPPRHH 386
HTHP E+ AQ T+ E R PSPPR +
Sbjct: 1694 HTHPSVGEDEEEAQDSVATERETARRPSPPRRY 1726
>UniRef50_A6E7Z1 Cluster: Membrane protein; n=2; Bacteria|Rep:
Membrane protein - Pedobacter sp. BAL39
Length = 155
Score = 31.5 bits (68), Expect = 6.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +2
Query: 89 PLAKRVLQTKPL-KLGQLG*RAFKPNTLSLSAIWFVKLLGTHSMRRGQWNCS 241
PL R + PL K G+ FKP + A WF L G G WN +
Sbjct: 3 PLQHRTEENSPLIKHGEKVRNPFKPTAAFIGASWFALLTGAVGYCIGLWNAT 54
>UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 458
Score = 31.5 bits (68), Expect = 6.1
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 190 REVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 327
R++ + EKR E L++ K++ L+ K + +R K+++EEL
Sbjct: 85 RKIKERKEREKREQEELRLKKEQEELRLKKEKEQEELRLKKEQEEL 130
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.1 bits (67), Expect = 8.1
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 112 DKAIKIRPA--RLKGIQTKHSKFVRDLVREVVGHAQ 213
D K+R A RL GIQTKH+K D V+ AQ
Sbjct: 281 DSIAKLRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
>UniRef50_Q4N5C9 Cluster: ATP-dependent protease, putative; n=2;
Theileria|Rep: ATP-dependent protease, putative -
Theileria parva
Length = 1115
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +1
Query: 133 PARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKR 312
P RL + S RD ++ ++ +KR +L+++K+ ++ + T + K
Sbjct: 407 PTRLADLIAGISLAKRDQLQNILAELNIDKRLTMVLEIAKNDLEFARVQNEVNTQLEEKL 466
Query: 313 KREELSNVLTQMRK 354
+++ +LT+ K
Sbjct: 467 SKDQRKYILTEQMK 480
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,062,967
Number of Sequences: 1657284
Number of extensions: 7271161
Number of successful extensions: 22312
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 21761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22285
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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