Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L05
         (160 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    19   7.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    19   7.4  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    19   7.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    19   7.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    19   7.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   7.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    18   9.8  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    18   9.8  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    18   9.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    18   9.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 160 LTHYIKPVYKIT*I*CIVLNPFGTLAAV 77
           L+++I+P+Y  + +   +LNP     AV
Sbjct: 452 LSYFIEPIYFHSIVLGSLLNPSHMYRAV 479


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 76  TLLRVSQMDLIQYIIFR*FCILAL 147
           ++L +S   L   +IF   CIL L
Sbjct: 18  SVLSLSLTSLASSLIFTILCILTL 41


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 76  TLLRVSQMDLIQYIIFR*FCILAL 147
           ++L +S   L   +IF   CIL L
Sbjct: 18  SVLSLSLTSLASSLIFTILCILTL 41


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 76  TLLRVSQMDLIQYIIFR*FCILAL 147
           ++L +S   L   +IF   CIL L
Sbjct: 18  SVLSLSLTSLASSLIFTILCILTL 41


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 76  TLLRVSQMDLIQYIIFR*FCILAL 147
           ++L +S   L   +IF   CIL L
Sbjct: 18  SVLSLSLTSLASSLIFTILCILTL 41


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 77  HCCECPKWI*YNTLYLGNFVYWLYIM 154
           HC  C  +       LG+F   L++M
Sbjct: 193 HCVVCQNFFYQIYATLGSFYIPLFVM 218


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 63  TVSNYTAASVPNGFNTIHYI*VILYT 140
           TV       +P  FN   +I   +YT
Sbjct: 689 TVYAVKTRKIPENFNESKFIGFTMYT 714


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -1

Query: 151 YIKPVYKI 128
           Y++PVYK+
Sbjct: 86  YVEPVYKM 93


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = -1

Query: 151 YIKPVYKI 128
           Y++PVYK+
Sbjct: 86  YVEPVYKM 93


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 63  TVSNYTAASVPNGFNTIHYI*VILYT 140
           TV       +P  FN   +I   +YT
Sbjct: 779 TVYAVKTRKIPENFNESKFIGFTMYT 804


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,305
Number of Sequences: 438
Number of extensions: 817
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 32
effective length of database: 132,327
effective search space used:  2646540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)