Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L04
         (236 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7AD8 Cluster: PREDICTED: similar to vegetable ...    33   0.93 
UniRef50_Q16RJ6 Cluster: Fkbp-rapamycin associated protein; n=1;...    32   2.8  
UniRef50_A2FKH2 Cluster: 3'5'-cyclic nucleotide phosphodiesteras...    31   3.8  
UniRef50_A5DCN9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_UPI0000DB7AD8 Cluster: PREDICTED: similar to vegetable
           CG6657-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to vegetable CG6657-PA, isoform A -
           Apis mellifera
          Length = 409

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 56  YCYLLFKLVILNAIPFTMVNYNNFVYFCISN 148
           +C L+F  +I++ IPF ++   N+V FCI N
Sbjct: 218 FC-LIFNTIIISIIPFILLQIYNYVMFCIPN 247


>UniRef50_Q16RJ6 Cluster: Fkbp-rapamycin associated protein; n=1;
            Aedes aegypti|Rep: Fkbp-rapamycin associated protein -
            Aedes aegypti (Yellowfever mosquito)
          Length = 2151

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = -2

Query: 202  HYFIIFNPY*SGL*LLLAITNTKIYKIVIINHRKW 98
            +YFI+F+     + +L  +  T+IYK++IIN +K+
Sbjct: 1026 NYFILFSEELGWIVMLRVLFQTQIYKLIIINFKKY 1060


>UniRef50_A2FKH2 Cluster: 3'5'-cyclic nucleotide phosphodiesterase
           family protein; n=1; Trichomonas vaginalis G3|Rep:
           3'5'-cyclic nucleotide phosphodiesterase family protein
           - Trichomonas vaginalis G3
          Length = 1086

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 214 DQIGHYFIIFNPY*S-GL*LLLAITNTKIYKIVIINHRKWNSIQYH 80
           D IGH+ +IFN +   G+  +  +TN K ++ +     K+  + YH
Sbjct: 767 DGIGHFKVIFNIFHHFGVLQIFKVTNEKFFRFLTALRDKYKKVPYH 812


>UniRef50_A5DCN9 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 618

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 62  YLLFKLVILNAIPFTMVNYNNFVYFCISN 148
           Y+L  L+ +N++P     +NNFV F +SN
Sbjct: 310 YVLQYLISINSLPINRAVFNNFVRFGVSN 338


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,713,044
Number of Sequences: 1657284
Number of extensions: 3201414
Number of successful extensions: 4850
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4849
length of database: 575,637,011
effective HSP length: 57
effective length of database: 481,171,823
effective search space used: 10104608283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)