Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L04
         (236 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119506-1|AAM50160.1|  704|Drosophila melanogaster GH12423p pro...    29   0.87 
AE014296-3274|AAF49073.2|  704|Drosophila melanogaster CG14186-P...    29   0.87 
AL121806-10|CAB58085.1|  692|Drosophila melanogaster EG:BACR42I1...    28   2.0  

>AY119506-1|AAM50160.1|  704|Drosophila melanogaster GH12423p
           protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 93  LFHLRWLIITILYIFVLVIASNS*SPDQ 176
           L   RWLIIT++Y+  +++A  S S D+
Sbjct: 608 LISFRWLIITMIYVATIILAICSDSIDE 635


>AE014296-3274|AAF49073.2|  704|Drosophila melanogaster CG14186-PA
           protein.
          Length = 704

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 93  LFHLRWLIITILYIFVLVIASNS*SPDQ 176
           L   RWLIIT++Y+  +++A  S S D+
Sbjct: 608 LISFRWLIITMIYVATIILAICSDSIDE 635


>AL121806-10|CAB58085.1|  692|Drosophila melanogaster EG:BACR42I17.9
           protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 13  TRIYSELFRQYHLSVLLSVI*ISDIECYSI 102
           T I S +FR +HL +L+S+  IS I C+++
Sbjct: 457 TTILSSMFRFFHLDILVSL--ISLISCFAL 484


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,816,078
Number of Sequences: 53049
Number of extensions: 131803
Number of successful extensions: 192
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 24,988,368
effective HSP length: 58
effective length of database: 21,911,526
effective search space used: 438230520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)