Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L04
         (236 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   6.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   6.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   6.2  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    19   8.3  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   8.3  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      19   8.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    19   8.3  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 115 INHRKWNS 92
           INH +WNS
Sbjct: 506 INHIRWNS 513


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 167 PRSIWIKNDK 196
           PR  W+KND+
Sbjct: 431 PRVQWLKNDE 440


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 115 INHRKWNS 92
           INH +WNS
Sbjct: 596 INHIRWNS 603


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
          preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 23 IQNYSDNII*AYCYLLFKLVIL 88
          ++NYS N       LLF  V++
Sbjct: 1  MKNYSKNATHLITVLLFSFVVI 22


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 59  CYLLFKLVILNAIPF 103
           CY+ F   +L  +PF
Sbjct: 117 CYVEFHPEVLQTVPF 131


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 23 IQNYSDNII*AYCYLLFKLVIL 88
          ++NYS N       LLF  V++
Sbjct: 1  MKNYSKNATHLITVLLFSFVVI 22


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 101 FTMVNYNNFVYF 136
           F ++NY  F+YF
Sbjct: 16  FILINYFIFLYF 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,126
Number of Sequences: 438
Number of extensions: 1154
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)