Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L03
         (234 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I3W5 Cluster: Putative uncharacterized protein PFE071...    31   3.8  
UniRef50_UPI00004984F2 Cluster: deoxycytidyl transferase; n=1; E...    31   5.0  
UniRef50_Q7VRU9 Cluster: Erythronate-4-phosphate dehydrogenase; ...    30   8.7  

>UniRef50_Q8I3W5 Cluster: Putative uncharacterized protein PFE0710w;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE0710w - Plasmodium falciparum (isolate 3D7)
          Length = 867

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 106 YLYLYVSKNISSVVYY*KRGTYKLNV*LTNCGMYNF*NQNNN 231
           Y+YLY+ KN    ++     T KLN+   N  +Y   N NNN
Sbjct: 107 YIYLYIHKNQKKNIFI---NTKKLNILQQNIILYTLQNNNNN 145


>UniRef50_UPI00004984F2 Cluster: deoxycytidyl transferase; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: deoxycytidyl
           transferase - Entamoeba histolytica HM-1:IMSS
          Length = 708

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 15/52 (28%), Positives = 32/52 (61%)
 Frame = +3

Query: 12  EEKVEEVTRYNKINTED*IEIMINIIRTRRLIPIFIRF*EYKFCGLLLKERY 167
           +E++EE+  +   NT++ I I+I+ +++R+ I  F      ++  +LLK +Y
Sbjct: 609 DERIEEIELFEIENTKELINILISYLKSRKEINFFHIELILQYLKILLKHQY 660


>UniRef50_Q7VRU9 Cluster: Erythronate-4-phosphate dehydrogenase;
           n=2; Candidatus Blochmannia|Rep: Erythronate-4-phosphate
           dehydrogenase - Blochmannia floridanus
          Length = 372

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -1

Query: 234 LIIILVSKIVHPAISQSHIKFVGTSLSVVNH--RTYILRN 121
           LII  ++K+ H  +  S IKF+GT  S V+H  + Y+  N
Sbjct: 41  LIIRSITKVNHMLLYDSSIKFIGTVTSGVDHIDQNYLKNN 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,292,961
Number of Sequences: 1657284
Number of extensions: 3331336
Number of successful extensions: 5184
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5184
length of database: 575,637,011
effective HSP length: 56
effective length of database: 482,829,107
effective search space used: 10139411247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)