Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_L02
         (244 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   2.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   2.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   3.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    19   5.8  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 214 GLVQRLCVFEFDYC 173
           G VQRL   +FD C
Sbjct: 199 GFVQRLDQIQFDIC 212


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 214 GLVQRLCVFEFDYC 173
           G VQRL   +FD C
Sbjct: 199 GFVQRLDQIQFDIC 212


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 71  QEKLKELFSKHGEITG 118
           + K+KE+  KH +  G
Sbjct: 193 EHKIKEIVKKHSQFIG 208


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 19.4 bits (38), Expect = 5.8
 Identities = 6/13 (46%), Positives = 6/13 (46%)
 Frame = +1

Query: 121 KTWSNHCNRTDHN 159
           K W   C R  HN
Sbjct: 58  KLWWEFCQRNGHN 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,996
Number of Sequences: 336
Number of extensions: 811
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3642386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)