Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L02
(244 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 27 0.35
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 26 0.61
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 26 0.80
SPAC5H10.02c |||ThiJ domain protein|Schizosaccharomyces pombe|ch... 25 1.1
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 1.4
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 25 1.4
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 24 2.4
SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyce... 24 3.2
SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase Mpg1|Sc... 24 3.2
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 24 3.2
SPAC2F7.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 3.2
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 24 3.2
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 23 4.3
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 23 4.3
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 23 4.3
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 23 5.6
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 23 5.6
SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces pom... 23 5.6
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 23 5.6
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 23 5.6
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 23 5.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 23 5.6
SPBC1778.09 |||GTPase activating protein |Schizosaccharomyces po... 23 5.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 23 5.6
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 23 7.5
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 23 7.5
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 22 9.9
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 22 9.9
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 22 9.9
SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces pomb... 22 9.9
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 22 9.9
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 22 9.9
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 22 9.9
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 27.1 bits (57), Expect = 0.35
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 65 DYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDGTVV 238
DY +EL S V R I+ + T P A +EF + ALL +G+++
Sbjct: 63 DYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSML 120
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 26.2 bits (55), Expect = 0.61
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 38 ENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
E+LPSS+ DY E KE + + G+ ++ + +TTP
Sbjct: 422 ESLPSSH--DYSESTKENSAPDSLLLGLVLDELVFSTTSTTP 461
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 0.80
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +2
Query: 29 LLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLD 208
+ V NLPS+ +L E F + + R T+ + +PTL A + F+N S D
Sbjct: 22 IYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTD-SKSPTLFAFITFENKCSAD 80
Query: 209 KAL 217
A+
Sbjct: 81 NAI 83
Score = 24.6 bits (51), Expect = 1.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 14 VESGKLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELT 154
++ L V+NL + + + Q+ L+ELFSK G I TE++
Sbjct: 416 IDPCNLFVKNLDDNIVGNTQQ-LEELFSKFGRIKSCTLASYPSTEIS 461
>SPAC5H10.02c |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 1.1
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 14 VESGKLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTL--SAIVEF 187
V G + +LP + + Q +E+F+ G ++ V GP+++ + ++ +V
Sbjct: 107 VAGGHAAMFDLPKAT--NLQAVAREVFTNGGVLSAVCHGPVLLANVKNPQSVEGKTVVYH 164
Query: 188 KNTESLDKALLEDGTVVD 241
K+ + +KA E V+D
Sbjct: 165 KHVTAFNKAGEEKMGVMD 182
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.0 bits (52), Expect = 1.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -2
Query: 243 PSTTVPSSNRALS---RDSVFLNSTIADNVGVVVSSVTMIGPRFTPVISP 103
PSTT+P+SN ++S S+ ++S I + S+ T P T I+P
Sbjct: 540 PSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATSTST---PALTHSITP 586
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 1.4
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +2
Query: 173 AIVEFKNTESLDKALLE-DGTVVDG 244
+ V+F+NT+ KAL E T++DG
Sbjct: 124 SFVQFQNTDDASKALSEAQNTILDG 148
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 24.2 bits (50), Expect = 2.4
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 26 KLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGP---IIVTELTTTPTLSAIVE 184
KLL ++ S+ + Y KL++LF + T ++ P II E T T + + E
Sbjct: 46 KLLTDHDQSASDYAYALKLQQLFDSENQATAPEKLPKDVIIPEEEYHTDTFNVVKE 101
>SPAC30D11.10 |rad22||DNA repair protein Rad22|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 469
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 240 STTVPSSNRALSRDSVFLNSTIADNVGVV 154
S T P SN ++ RDS + + +N+G++
Sbjct: 395 SQTSPVSNNSMIRDSESIINERKENIGLI 423
>SPCC1906.01 |mpg1||mannose-1-phosphate guanyltransferase
Mpg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 363
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 128 GPIIVTELTTTPTLSAIVEFKNTESLDKALLE 223
G I+VT++ +V + N+ESL + +E
Sbjct: 131 GTIVVTKVEEPSKYGVVVHYPNSESLIERFVE 162
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 23.8 bits (49), Expect = 3.2
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 243 PSTT-VPSSNRALSRDSVFLNSTIADNVGVVVSSVT 139
P+T+ VP+++ + S+ NSTI + + S++T
Sbjct: 116 PTTSPVPTTSSTPTSSSILSNSTIPSSSSISASTIT 151
>SPAC2F7.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 23.8 bits (49), Expect = 3.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 237 TTVPSSNRALSRDSVFLNSTIADNVGVVVSSVTMIGPRFTPVISP 103
T +P+ ++++ NST DNV +V S + + FT I P
Sbjct: 389 TKLPAHITSITKLQSLENSTKNDNVPLVTHSPSPMHSSFTVSIKP 433
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 23.8 bits (49), Expect = 3.2
Identities = 6/22 (27%), Positives = 16/22 (72%)
Frame = -2
Query: 159 VVVSSVTMIGPRFTPVISPCFE 94
++VS+ ++GP + +++PC +
Sbjct: 49 ILVSAFALLGPMASSMVAPCLD 70
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 23.4 bits (48), Expect = 4.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 41 NLPSSYLFDYQEKLKE 88
N P S L DYQ K+ E
Sbjct: 255 NTPESLLIDYQSKIPE 270
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 23.4 bits (48), Expect = 4.3
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 71 QEKLKELFSKHGE 109
+EKLK++FS HG+
Sbjct: 148 REKLKDIFSPHGK 160
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 23.4 bits (48), Expect = 4.3
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -2
Query: 231 VPSSNRALSRDSVFLN--STIADNVGVVVSSVTMIGPRFTPVISPC 100
+PSS+ + + FL+ + +NV + G + PV+SPC
Sbjct: 139 IPSSSSYETAVAEFLHMEDLLQENVSRELECQICFGMLYDPVVSPC 184
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 23.0 bits (47), Expect = 5.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 27 NYSLRIFLRATYLTTRKSSKS 89
NY+ +FL Y +T++ S+S
Sbjct: 35 NYNANVFLGVAYFSTKQLSES 55
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 23.0 bits (47), Expect = 5.6
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 173 AIVEFKNTESLDKALL 220
A ++FK+T +DKALL
Sbjct: 314 AYIQFKDTMGVDKALL 329
>SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 184
Score = 23.0 bits (47), Expect = 5.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 9 RGWNLVNYSLRIFLRATYL 65
RGW +V Y+L I+L +L
Sbjct: 55 RGWYIVCYTLAIYLLNLFL 73
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 23.0 bits (47), Expect = 5.6
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 26 KLLVENLPSSYLFD-YQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTES 202
+++++N+P Y + LK L EIT V + A + FKN E
Sbjct: 3 RIIIKNIPRYYDKEKLSTYLKSLPQLDAEITDVS----VAKTKEGVSRRFAFIGFKNEED 58
Query: 203 LDKAL 217
DKA+
Sbjct: 59 ADKAI 63
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 136 HCNRTDHNSDIIGNSRIQKHR 198
HCNRT D I S I K R
Sbjct: 61 HCNRTHWEQDKIHQSLIPKLR 81
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 85 RAVLKTRRNHRRKTWSNHCNRTDHNSDIIGNSR 183
R +K + N+R ++ + H N T S + N+R
Sbjct: 422 RKCVKKQMNYREESHTPHGNTTRKTSTPVSNNR 454
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +2
Query: 59 LFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIV 181
LF ++ L+E+ + + +GP + T PT S ++
Sbjct: 1554 LFSTEKALREITKERDRLLHGLQGPSVPTSPLKAPTASQLI 1594
>SPBC1778.09 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 414
Score = 23.0 bits (47), Expect = 5.6
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +3
Query: 216 CWRTARWWT 242
CWR+ WW+
Sbjct: 162 CWRSIAWWS 170
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 178 YCR*CRSCGQFCYNDWTTFYAG 113
YC C S + CY D + FY G
Sbjct: 4058 YCFTCSSWKEPCYFDDSDFYFG 4079
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 22.6 bits (46), Expect = 7.5
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 63 LTTRKSSKS-CSQNTAKSP 116
+T RK S S SQNTA+SP
Sbjct: 222 MTLRKRSVSPSSQNTARSP 240
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 22.6 bits (46), Expect = 7.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -2
Query: 243 PSTTVPSSNRALSRDSVFLNSTIADNVGVVVSSVTMIGPRFTPV 112
P TTV SS+ + S ++++ + V+VSS TPV
Sbjct: 96 PITTVSSSDSFIPSSSQTISASSSTTDNVIVSSSISSTVSSTPV 139
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 22.2 bits (45), Expect = 9.9
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +2
Query: 62 FDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLED 226
F Y+ + S TG GP TPT+ ++F+N + + ED
Sbjct: 140 FSYKAGCSDSCSVTVSGTGELIGPTRNAHSNLTPTVIQRIDFENVNEKNNSSSED 194
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 22.2 bits (45), Expect = 9.9
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 77 KLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFK-NTESLDK 211
KL F + P + TEL T PTL ++ N E + K
Sbjct: 620 KLGNTFVAPSPAASLPASPPVGTELKTRPTLRSVASSPLNKEPIGK 665
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -1
Query: 184 FDYCR*CRSCGQFCYNDWTTFYAGDFAVF 98
F Y R S FC N T+Y D +F
Sbjct: 76 FSYFRVLFSSPSFCGNTLYTYYGFDNPIF 104
>SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 377
Score = 22.2 bits (45), Expect = 9.9
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3
Query: 50 KEDSQRVIYQIPPS 9
KED R+I++IP S
Sbjct: 256 KEDGDRIIFEIPIS 269
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 22.2 bits (45), Expect = 9.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3
Query: 195 QSLWTRPCWRT 227
QSL +R CWRT
Sbjct: 360 QSLQSRGCWRT 370
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 22.2 bits (45), Expect = 9.9
Identities = 10/45 (22%), Positives = 22/45 (48%)
Frame = -2
Query: 240 STTVPSSNRALSRDSVFLNSTIADNVGVVVSSVTMIGPRFTPVIS 106
STT S++ + + S+ + N+ S+ PRF+ +++
Sbjct: 304 STTPTSNSHSTENPLAIIPSSTSKNLLPETPSIVRFNPRFSQLVT 348
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 22.2 bits (45), Expect = 9.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 183 NSKTQSLWTRPCWRTARWWT 242
N + SL TR WR R W+
Sbjct: 78 NPTSSSLSTRKRWRQKRLWS 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 950,081
Number of Sequences: 5004
Number of extensions: 15212
Number of successful extensions: 69
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 59
effective length of database: 2,067,242
effective search space used: 43412082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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