Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L02
(244 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 37 0.002
02_04_0518 + 23601355-23602498,23603481-23603779 37 0.003
04_04_0206 + 23595268-23595279,23595475-23596317,23597037-235970... 36 0.003
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 34 0.014
01_01_1143 - 9064210-9065682 34 0.014
01_06_0833 + 32296957-32297256,32299257-32299895 34 0.018
08_02_1176 + 24931728-24931877,24933175-24933275,24934410-249347... 33 0.024
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 33 0.042
01_06_0834 + 32302065-32302143,32303136-32303275,32303371-323034... 32 0.056
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 29 0.40
04_04_1121 - 31041629-31041793,31041891-31042022,31042255-310424... 29 0.40
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 27 1.6
02_04_0616 + 24416924-24418162 27 2.1
11_01_0673 - 5491694-5493102,5493386-5493995 26 3.7
07_03_1061 + 23651404-23651625,23651764-23652954 26 4.9
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 26 4.9
12_01_0394 - 3105306-3106596,3107815-3107861 25 6.4
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 25 6.4
02_02_0412 - 9950286-9950380,9950530-9951203,9951402-9951580,995... 25 6.4
11_04_0224 + 15059904-15059910,15059955-15060185,15060345-150604... 25 8.5
08_02_0448 + 17239987-17240489,17240633-17241042,17241183-172414... 25 8.5
06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833... 25 8.5
04_04_1651 - 35057525-35057680,35058302-35058311,35058429-350585... 25 8.5
03_05_1134 + 30624373-30624378,30624474-30624592,30624729-306248... 25 8.5
03_02_0610 + 9834083-9834368,9834495-9834556,9834695-9834787,983... 25 8.5
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 25 8.5
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLE-DGTVVDG 244
++ LKE+F +GE+ V+ + + + P VEFKN +KALL DG +DG
Sbjct: 149 EDHLKEIFENYGEVVNVE---LSMDRVVNLPRGYGYVEFKNRADAEKALLYLDGGQIDG 204
>02_04_0518 + 23601355-23602498,23603481-23603779
Length = 480
Score = 36.7 bits (81), Expect = 0.003
Identities = 28/73 (38%), Positives = 37/73 (50%)
Frame = +2
Query: 26 KLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESL 205
KL V+N+P+ D +L+ LFS+ GEI + GP+ T AI +K E L
Sbjct: 192 KLFVDNVPARAAHD---ELRRLFSRFGEI---EAGPLGADRATGQFRGYAIFFYKYPEGL 245
Query: 206 DKALLEDGTVVDG 244
KAL E V DG
Sbjct: 246 TKALEERKVVFDG 258
>04_04_0206 +
23595268-23595279,23595475-23596317,23597037-23597088,
23597328-23597395,23597482-23597585,23597681-23597768,
23598405-23598722
Length = 494
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 83 KELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDGT 232
K+ S+H G +IVT++ PT SA +EF + ES ++AL D T
Sbjct: 332 KDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQALTLDNT 381
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 34.3 bits (75), Expect = 0.014
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 29 LLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLD 208
L ++NL S D EKLKE+F+ G IT K ++ +L S V FK+ E
Sbjct: 323 LYLKNLDDS--IDDDEKLKEIFADFGTITSCK----VMRDLNGVSKGSGFVAFKSAEDAS 376
Query: 209 KALL 220
+AL+
Sbjct: 377 RALV 380
>01_01_1143 - 9064210-9065682
Length = 490
Score = 34.3 bits (75), Expect = 0.014
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 74 EKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDGTVVDG 244
+KL + FSK+GEI + GP+ + ++T P A+ +K +S KAL E +G
Sbjct: 281 QKLLQFFSKYGEI---EEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEG 334
>01_06_0833 + 32296957-32297256,32299257-32299895
Length = 312
Score = 33.9 bits (74), Expect = 0.018
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = +2
Query: 26 KLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESL 205
K+ V LP S ++KLKE F+K GE V R +++ T P ++F + ES
Sbjct: 125 KIFVGGLPVSAT---EKKLKEYFNKFGE---VNRAIVVIDLNTKMPRGFGFIQFASEEST 178
Query: 206 DKALLED 226
+AL +D
Sbjct: 179 ARALKKD 185
>08_02_1176 +
24931728-24931877,24933175-24933275,24934410-24934788,
24935509-24936354,24936555-24936642,24936947-24937039,
24937221-24937318,24937364-24937470,24938266-24938353,
24938748-24939005
Length = 735
Score = 33.5 bits (73), Expect = 0.024
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 83 KELFSKHGEITGVKRGPIIVTELTT-TPTLSAIVEFKNTESLDKALLEDGT 232
K+ S+H G +IVT T PT SA VEF + ES ++AL +GT
Sbjct: 592 KDALSRHFNKFGAVLKVVIVTNAATGQPTGSAYVEFLHKESAERALSLNGT 642
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 32.7 bits (71), Expect = 0.042
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 29 LLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGP 133
+ V+NLP + +EK+KE+F KHGE+T V P
Sbjct: 317 IYVKNLPENAS---KEKIKEIFEKHGEVTKVVLPP 348
>01_06_0834 +
32302065-32302143,32303136-32303275,32303371-32303436,
32303867-32303950,32304532-32304699,32305061-32305126,
32306027-32306452
Length = 342
Score = 32.3 bits (70), Expect = 0.056
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 77 KLKELFSKHGEITGVKRGPIIVTELTT-TPTLSAIVEFKNTESLDKALLED 226
KLKE FS GE+ I+VT+L T P +++F + ES +AL +D
Sbjct: 123 KLKEYFSNFGEVNRA----IVVTDLNTKMPRGFGLIQFASEESTARALKKD 169
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 29.5 bits (63), Expect = 0.40
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 29 LLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGP 133
+ V+NLP + +EK+KE+F HGE+T V P
Sbjct: 289 IYVKNLPENAS---KEKIKEIFEIHGEVTKVVLPP 320
>04_04_1121 -
31041629-31041793,31041891-31042022,31042255-31042425,
31042521-31042622,31042703-31042807,31043115-31043286,
31043916-31043980,31044179-31044502,31044729-31044846,
31044928-31045011,31045472-31045603,31045714-31046570,
31046735-31046849,31047371-31047481,31047763-31047824
Length = 904
Score = 29.5 bits (63), Expect = 0.40
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +2
Query: 20 SGKLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTE 199
S +L V+NLP + +L+E+FS+ GE+T K ++ A V F+ E
Sbjct: 22 SSRLCVKNLPKGA---DEGRLREVFSRKGEVTDAK----VIRTKDGKSRQFAFVGFRTNE 74
Query: 200 SLDKAL 217
++AL
Sbjct: 75 EAEEAL 80
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 29 LLVENLPSSYLFDYQEKLKELFSKHGEITGV 121
+ V+ +P+S+ D+ + LKE+F KHG+I V
Sbjct: 413 IFVDGIPTSW--DHAQ-LKEIFKKHGKIESV 440
>02_04_0616 + 24416924-24418162
Length = 412
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 65 DYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESL 205
DYQ+KL+ L + G++T +R I L LS VE N ++L
Sbjct: 149 DYQDKLEALLPRAGKLTEEQRIQIFTAGLQL--PLSLDVEIHNPQTL 193
>11_01_0673 - 5491694-5493102,5493386-5493995
Length = 672
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +2
Query: 14 VESGKLLVENLPSSYL---FDYQEKLKELFSKHG--EITGV 121
++SG L++E+LP YL FDY +L +K G ++TG+
Sbjct: 162 LDSGNLVIESLPDVYLWQSFDYPTELVLPGAKIGWNKVTGL 202
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEKLKELFSKHGEIT 115
+SGKL V + S+ D +++L+E FS+ GE+T
Sbjct: 4 DSGKLFVGGI--SWETD-EDRLREYFSRFGEVT 33
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 25.8 bits (54), Expect = 4.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 228 PSSNRALSRDSVFLNSTIADNVGVVVSSV--TMIGPRFTP 115
PS + A R S FLN+ NVG S+V ++IG P
Sbjct: 26 PSDDSAPRRPSTFLNAVALGNVGAGKSAVLNSLIGHPVLP 65
>12_01_0394 - 3105306-3106596,3107815-3107861
Length = 445
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 55 LPI*LPGKAQRAVLKTRRNHRRK 123
LP+ P K R+V TRR RRK
Sbjct: 133 LPMLSPSKGVRSVPSTRREERRK 155
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDGTVVD 241
+ K K L K+G++T P V ++ P+ + E + T+ ++ L DGTV+D
Sbjct: 354 RSKGKPLPPKYGKVTRTVVAPK-VNLISGVPS-QGVSENRTTKDNNQELAADGTVID 408
>02_02_0412 -
9950286-9950380,9950530-9951203,9951402-9951580,
9952578-9952633,9953233-9953262,9953820-9953982
Length = 398
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 168 NVGVVVSSVTMIGPRFTPVISPC 100
NVG V S ++ PRF ++S C
Sbjct: 286 NVGFVTQSKELLMPRFDKILSGC 308
>11_04_0224 +
15059904-15059910,15059955-15060185,15060345-15060424,
15060497-15060547,15060548-15060670,15062151-15062184,
15062363-15062441,15062779-15062848,15075787-15075889,
15076247-15076284,15076449-15076550,15077027-15077107,
15077506-15077657,15077731-15077857,15078193-15078311,
15078636-15078749,15079001-15079214
Length = 574
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 208 VQRLCVFEFDYCR*CRSCGQFCYNDWTTFYAGDFAVF 98
+Q +C FD CR FCY+ + T++ D F
Sbjct: 200 IQIICYSNFDACR---QNLDFCYSSFHTYWLHDHPQF 233
>08_02_0448 +
17239987-17240489,17240633-17241042,17241183-17241406,
17241590-17242018,17244726-17244809
Length = 549
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTT 157
Q + + +FSKHG + P+++ E TT
Sbjct: 109 QTRDETIFSKHGNVCRSMWPPVLIMEWTT 137
>06_03_1318 -
29282562-29282566,29282727-29282810,29282913-29283380,
29283735-29283917,29284362-29284467,29284627-29284651,
29284736-29284855,29284920-29284997,29285646-29285774,
29285976-29285989,29286168-29287944,29288344-29288489,
29288921-29291029
Length = 1747
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 71 GSQIGSSKEDSQRVIYQIPPSCR 3
G+ G K+ +RV++ +PPS R
Sbjct: 711 GADDGKQKQPDRRVVFLLPPSRR 733
>04_04_1651 -
35057525-35057680,35058302-35058311,35058429-35058569,
35058675-35058784,35058907-35059006,35059108-35059308,
35059674-35059879,35060504-35060716,35060785-35060923,
35061370-35061606,35061688-35061893,35062664-35062759,
35062900-35063040
Length = 651
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 56 YLFDYQEKLKELFSK 100
+LFDYQ LK+LF +
Sbjct: 410 FLFDYQSTLKQLFQE 424
>03_05_1134 +
30624373-30624378,30624474-30624592,30624729-30624807,
30625784-30625858,30625954-30626028,30626314-30626651,
30626881-30627004,30627070-30627093
Length = 279
Score = 25.0 bits (52), Expect = 8.5
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDG-TVVD 241
+ +++E FS GEI V I + T T A V FK+ ++L+ ALL G T+VD
Sbjct: 22 EREVREFFSFSGEIEHVD---IRCDGVATGRT--AYVTFKDPKALEIALLLSGATIVD 74
>03_02_0610 +
9834083-9834368,9834495-9834556,9834695-9834787,
9835689-9835805,9835972-9836055,9836198-9836293,
9836368-9836445,9836548-9836637,9836733-9836800,
9836940-9837021,9838203-9838289
Length = 380
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 243 PSTTVPSSNRALSRDSVFLNSTIADNVGVVVSSVTMIGPRFTPVIS 106
PS++ SS R +R S T A + G +S++ PR V++
Sbjct: 18 PSSSSSSSPRRAARASSIKCCTAASDAGASSASISSASPRRPDVVN 63
>01_07_0084 +
40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -3
Query: 50 KEDSQRVIYQIPPS 9
K DS+RVI+QIPP+
Sbjct: 572 KLDSKRVIWQIPPA 585
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,098,679
Number of Sequences: 37544
Number of extensions: 92778
Number of successful extensions: 316
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 14,793,348
effective HSP length: 59
effective length of database: 12,578,252
effective search space used: 264143292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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