Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L02
(244 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 37 0.014
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 37 0.014
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 37 0.014
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 32 0.30
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 32 0.30
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 32 0.30
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 32 0.30
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 32 0.30
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 32 0.30
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 32 0.30
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 29 3.6
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 29 3.6
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 29 3.6
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 29 3.6
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 29 3.6
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 29 3.6
CR533492-1|CAG38523.1| 198|Homo sapiens SARA1 protein. 28 4.8
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 28 4.8
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 28 4.8
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 28 4.8
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 28 4.8
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 28 4.8
BC003658-1|AAH03658.1| 198|Homo sapiens SAR1 gene homolog A (S.... 28 6.3
AY008268-1|AAG16638.1| 198|Homo sapiens GTP-binding protein SAR... 28 6.3
AL731540-7|CAI13688.1| 198|Homo sapiens SAR1 gene homolog A (S.... 28 6.3
AL731540-6|CAI13687.1| 114|Homo sapiens SAR1 gene homolog A (S.... 28 6.3
AF318066-1|AAL27183.1| 198|Homo sapiens small GTP-binding prote... 28 6.3
AF261717-1|AAF81741.1| 198|Homo sapiens SAR1 protein. 28 6.3
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNT 196
ESG+L V NLP + +E L++LFSK+G ++ + PI LT P A + F
Sbjct: 400 ESGRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFP 453
Query: 197 ESLDKALLE-DGTVVDG 244
E KA E DG V G
Sbjct: 454 EHAVKAYSEVDGQVFQG 470
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS---AIVEFKNTESLDKALLE-DGTVV 238
+EKLKE+FSK G VK I + LS VE++ E KAL + G VV
Sbjct: 743 EEKLKEVFSKVGT---VKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVV 799
Query: 239 DG 244
DG
Sbjct: 800 DG 801
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNT 196
ESG+L V NLP + +E L++LFSK+G ++ + PI LT P A + F
Sbjct: 400 ESGRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFP 453
Query: 197 ESLDKALLE-DGTVVDG 244
E KA E DG V G
Sbjct: 454 EHAVKAYSEVDGQVFQG 470
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS---AIVEFKNTESLDKALLE-DGTVV 238
+EKLKE+FSK G VK I + LS VE++ E KAL + G VV
Sbjct: 743 EEKLKEVFSKVGT---VKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVV 799
Query: 239 DG 244
DG
Sbjct: 800 DG 801
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNT 196
ESG+L V NLP + +E L++LFSK+G ++ + PI LT P A + F
Sbjct: 413 ESGRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFP 466
Query: 197 ESLDKALLE-DGTVVDG 244
E KA E DG V G
Sbjct: 467 EHAVKAYSEVDGQVFQG 483
Score = 28.3 bits (60), Expect = 4.8
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS---AIVEFKNTESLDKALLE-DGTVV 238
+EKLKE+FSK G VK I + LS VE++ E KAL + G VV
Sbjct: 756 EEKLKEVFSKVGT---VKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVV 812
Query: 239 DG 244
DG
Sbjct: 813 DG 814
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFKNTESLDKALLE-DGTVVD 241
++KLKE+FS++G+I ++ +V +L T + A +E+K ++ KA + DG V+D
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVID 118
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFKNTESLDKALLE-DGTVVD 241
++KLKE+FS++G+I ++ +V +L T + A +E+K ++ KA + DG V+D
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVID 118
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFKNTESLDKALLE-DGTVVD 241
++KLKE+FS++G+I ++ +V +L T + A +E+K ++ KA + DG V+D
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVID 123
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFKNTESLDKALLE-DGTVVD 241
++KLKE+FS++G+I ++ +V +L T + A +E+K ++ KA + DG V+D
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVID 123
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFKNTESLDKALLE-DGTVVD 241
++KLKE+FS++G+I ++ +V +L T + A +E+K ++ KA + DG V+D
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVID 118
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFKNTESLDKALLE-DGTVVD 241
++KLKE+FS++G+I ++ +V +L T + A +E+K ++ KA + DG V+D
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVID 123
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFKNTESLDKALLE-DGTVVD 241
++KLKE+FS++G+I ++ +V +L T + A +E+K ++ KA + DG V+D
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVID 123
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEK-LKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFK 190
+ GKL V L FD E+ L+++FSK+G+I+ V ++V + T + V F+
Sbjct: 4 DEGKLFVGGLS----FDTNEQSLEQVFSKYGQISEV----VVVKDRETQRSRGFGFVTFE 55
Query: 191 NTESLDKALLE-DGTVVDG 244
N + A++ +G VDG
Sbjct: 56 NIDDAKDAMMAMNGKSVDG 74
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEK-LKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFK 190
+ GKL V L FD E+ L+++FSK+G+I+ V ++V + T + V F+
Sbjct: 4 DEGKLFVGGLS----FDTNEQSLEQVFSKYGQISEV----VVVKDRETQRSRGFGFVTFE 55
Query: 191 NTESLDKALLE-DGTVVDG 244
N + A++ +G VDG
Sbjct: 56 NIDDAKDAMMAMNGKSVDG 74
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEK-LKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFK 190
+ GKL V L FD E+ L+++FSK+G+I+ V ++V + T + V F+
Sbjct: 4 DEGKLFVGGLS----FDTNEQSLEQVFSKYGQISEV----VVVKDRETQRSRGFGFVTFE 55
Query: 191 NTESLDKALLE-DGTVVDG 244
N + A++ +G VDG
Sbjct: 56 NIDDAKDAMMAMNGKSVDG 74
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEK-LKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFK 190
+ GKL V L FD E+ L+++FSK+G+I+ V ++V + T + V F+
Sbjct: 4 DEGKLFVGGLS----FDTNEQSLEQVFSKYGQISEV----VVVKDRETQRSRGFGFVTFE 55
Query: 191 NTESLDKALLE-DGTVVDG 244
N + A++ +G VDG
Sbjct: 56 NIDDAKDAMMAMNGKSVDG 74
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEK-LKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFK 190
+ GKL V L FD E+ L+++FSK+G+I+ V ++V + T + V F+
Sbjct: 4 DEGKLFVGGLS----FDTNEQSLEQVFSKYGQISEV----VVVKDRETQRSRGFGFVTFE 55
Query: 191 NTESLDKALLE-DGTVVDG 244
N + A++ +G VDG
Sbjct: 56 NIDDAKDAMMAMNGKSVDG 74
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 ESGKLLVENLPSSYLFDYQEK-LKELFSKHGEITGVKRGPIIVTELTTTPTLS-AIVEFK 190
+ GKL V L FD E+ L+++FSK+G+I+ V ++V + T + V F+
Sbjct: 4 DEGKLFVGGLS----FDTNEQSLEQVFSKYGQISEV----VVVKDRETQRSRGFGFVTFE 55
Query: 191 NTESLDKALLE-DGTVVDG 244
N + A++ +G VDG
Sbjct: 56 NIDDAKDAMMAMNGKSVDG 74
>CR533492-1|CAG38523.1| 198|Homo sapiens SARA1 protein.
Length = 198
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
+EKL+E+F +G+ TG +G + + EL P
Sbjct: 144 EEKLREIFGLYGQTTG--KGDVTLKELNARP 172
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 EKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLE-DGTVVDG 244
EKLKELF ++G VK ++ + + V ++ E+ KA+L+ G +DG
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDG 266
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 EKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLE-DGTVVDG 244
EKLKELF ++G VK ++ + + V ++ E+ KA+L+ G +DG
Sbjct: 49 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDG 102
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 EKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLE-DGTVVDG 244
EKLKELF ++G VK ++ + + V ++ E+ KA+L+ G +DG
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDG 266
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 EKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLE-DGTVVDG 244
EKLKELF ++G VK ++ + + V ++ E+ KA+L+ G +DG
Sbjct: 198 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDG 251
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 74 EKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLE-DGTVVDG 244
EKLKELF ++G VK ++ + + V ++ E+ KA+L+ G +DG
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDG 266
>BC003658-1|AAH03658.1| 198|Homo sapiens SAR1 gene homolog A (S.
cerevisiae) protein.
Length = 198
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
+EKL+E+F +G+ TG +G + + EL P
Sbjct: 144 EEKLREIFGLYGQTTG--KGNVTLKELNARP 172
>AY008268-1|AAG16638.1| 198|Homo sapiens GTP-binding protein SAR1
protein.
Length = 198
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
+EKL+E+F +G+ TG +G + + EL P
Sbjct: 144 EEKLREIFGLYGQTTG--KGNVTLKELNARP 172
>AL731540-7|CAI13688.1| 198|Homo sapiens SAR1 gene homolog A (S.
cerevisiae) protein.
Length = 198
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
+EKL+E+F +G+ TG +G + + EL P
Sbjct: 144 EEKLREIFGLYGQTTG--KGNVTLKELNARP 172
>AL731540-6|CAI13687.1| 114|Homo sapiens SAR1 gene homolog A (S.
cerevisiae) protein.
Length = 114
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
+EKL+E+F +G+ TG +G + + EL P
Sbjct: 60 EEKLREIFGLYGQTTG--KGNVTLKELNARP 88
>AF318066-1|AAL27183.1| 198|Homo sapiens small GTP-binding protein
protein.
Length = 198
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
+EKL+E+F +G+ TG +G + + EL P
Sbjct: 144 EEKLREIFGLYGQTTG--KGNVTLKELNARP 172
>AF261717-1|AAF81741.1| 198|Homo sapiens SAR1 protein.
Length = 198
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTP 163
+EKL+E+F +G+ TG +G + + EL P
Sbjct: 144 EEKLREIFGLYGQTTG--KGNVTLKELNARP 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,638,352
Number of Sequences: 237096
Number of extensions: 502574
Number of successful extensions: 1695
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1692
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1388364868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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