Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_L02
(244 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039050-5|AAC47938.1| 499|Caenorhabditis elegans Cytochrome p4... 30 0.25
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 29 0.58
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 29 0.58
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 1.3
Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 1.8
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 27 1.8
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 27 1.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 27 1.8
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 27 2.3
Z50857-6|CAA90720.1| 283|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z50806-6|CAA90692.1| 283|Caenorhabditis elegans Hypothetical pr... 26 4.1
AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein. 26 4.1
AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical... 26 4.1
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 25 5.4
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 25 5.4
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 25 5.4
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical pr... 25 7.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 25 7.1
AL009246-5|CAA15839.1| 357|Caenorhabditis elegans Hypothetical ... 25 7.1
AC024798-7|AAK29916.2| 288|Caenorhabditis elegans Hypothetical ... 25 9.4
>AF039050-5|AAC47938.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 34A8 protein.
Length = 499
Score = 29.9 bits (64), Expect = 0.25
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 59 LFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSA-IVEFKNTESLDKA----LLE 223
L ++ E +++L + E+TG RG + +T+ T TP L+A I EF+ S+ +LE
Sbjct: 324 LLNHPEVVEKLRKELTEVTGGTRG-VSLTDRTKTPYLNANINEFQRIASILNVNLFRVLE 382
Query: 224 DGTVVD 241
+ T +D
Sbjct: 383 EDTTID 388
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 28.7 bits (61), Expect = 0.58
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKAL 217
QEKL +FSK GEIT +++T+ P V F + ++ +A+
Sbjct: 251 QEKLSAMFSKFGEITSA----VVMTDAQGKPKGFGFVAFADQDAAGQAV 295
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 28.7 bits (61), Expect = 0.58
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 71 QEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKAL 217
QEKL +FSK GEIT +++T+ P V F + ++ +A+
Sbjct: 251 QEKLSAMFSKFGEITSA----VVMTDAQGKPKGFGFVAFADQDAAGQAV 295
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 68 YQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDGTVVDG 244
YQE +L +GEI +K+ +++ E T + E K TES++ L + V+G
Sbjct: 632 YQEMKAQLEMAYGEIQSLKKENLMIEERT-------LEELKQTESVELQRLVESINVEG 683
>Z75537-3|CAA99836.1| 1096|Caenorhabditis elegans Hypothetical
protein F18E2.3 protein.
Length = 1096
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 53 SYLFDYQEKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLD 208
++L + E L L KH + +K + LTT ++SA+VE + LD
Sbjct: 624 THLMELMEGLDSLIEKHLDEELLKAVAELYYHLTTNSSISALVEGHKMKLLD 675
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 26 KLLVENLPSSYLFDYQEKLKELFSKHGEI 112
+L V NLP+ + +LKELFS HG+I
Sbjct: 117 RLFVGNLPNEVK---ETELKELFSPHGDI 142
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 26 KLLVENLPSSYLFDYQEKLKELFSKHGEI 112
+L V NLP+ + +LKELFS HG+I
Sbjct: 117 RLFVGNLPNEVK---ETELKELFSPHGDI 142
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 26 KLLVENLPSSYLFDYQEKLKELFSKHGEI 112
+L V NLP+ + +LKELFS HG+I
Sbjct: 117 RLFVGNLPNEVK---ETELKELFSPHGDI 142
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 152 TTTPTLSAIVEFKNTESLDKALLED 226
T P A VEFKNTE KA+ D
Sbjct: 98 TGRPNGEAYVEFKNTEEAGKAMEND 122
>Z50857-6|CAA90720.1| 283|Caenorhabditis elegans Hypothetical
protein M79.2 protein.
Length = 283
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 128 GPIIVTELTTTPTLSAIVEFKNTESLDKALLEDGTV 235
GP T T PTL ++ KN S +KA+ G +
Sbjct: 130 GPCFQTAPTIRPTLLGMMPEKNWNSTEKAIFFAGLI 165
>Z50806-6|CAA90692.1| 283|Caenorhabditis elegans Hypothetical
protein M79.2 protein.
Length = 283
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 128 GPIIVTELTTTPTLSAIVEFKNTESLDKALLEDGTV 235
GP T T PTL ++ KN S +KA+ G +
Sbjct: 130 GPCFQTAPTIRPTLLGMMPEKNWNSTEKAIFFAGLI 165
>AY533304-1|AAS21306.1| 359|Caenorhabditis elegans BRE-2 protein.
Length = 359
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 103 RRNHRRKTWSNHCNRTDHNSDIIGNSRIQ 189
RRN RKTW N NS IIG+ R++
Sbjct: 101 RRNILRKTWMN-----PENSQIIGDGRMK 124
>AL110487-12|CAB54430.2| 308|Caenorhabditis elegans Hypothetical
protein Y39E4B.9 protein.
Length = 308
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 103 RRNHRRKTWSNHCNRTDHNSDIIGNSRIQ 189
RRN RKTW N NS IIG+ R++
Sbjct: 101 RRNILRKTWMN-----PENSQIIGDGRMK 124
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 158 TPTLSAIVEFKNTESLDKALL 220
TPT SA VE N+ S+++ALL
Sbjct: 197 TPTQSANVERSNSPSIEEALL 217
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 158 TPTLSAIVEFKNTESLDKALL 220
TPT SA VE N+ S+++ALL
Sbjct: 219 TPTQSANVERSNSPSIEEALL 239
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 158 TPTLSAIVEFKNTESLDKALL 220
TPT SA VE N+ S+++ALL
Sbjct: 219 TPTQSANVERSNSPSIEEALL 239
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 240 STTVPSSNRALSRDSVFLNSTIA 172
STT+P + SR+ F+N IA
Sbjct: 207 STTIPMKSEKPSRNETFINKVIA 229
>Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical
protein F52H3.1 protein.
Length = 730
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 74 EKLKELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDG 229
+ +++ KHG+ KR VTE+ + +E+ +++ A L DG
Sbjct: 327 KNIQDFLQKHGKSYYTKRVINGVTEIGDREARNEAIEWNKARNVEFAFLMDG 378
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 243 PSTTVPSSNRALSRDSVFLNSTIADNVGVVVSSVTMIGP 127
PST PS++ A+ +V + +TIA V T +GP
Sbjct: 1208 PSTAAPSTSTAVPTTTVPVTTTIATTTRVTTVRPT-VGP 1245
>AL009246-5|CAA15839.1| 357|Caenorhabditis elegans Hypothetical
protein C47F8.6 protein.
Length = 357
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 79 AQRAVLKTRRNHRRKTWSNHCNRTDHNSDIIGNSRIQ 189
A R RRN R+TW N NS+I+ N R++
Sbjct: 98 ASRTDSYARRNIMRQTWMN-----KSNSEIVANGRMK 129
>AC024798-7|AAK29916.2| 288|Caenorhabditis elegans Hypothetical
protein Y48G9A.6 protein.
Length = 288
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 86 ELFSKHGEITGVKRGPIIVTELTTTPTLSAIVEFKNTESLDKALLEDG 229
+L S HGE+ G + I E+T + ++ + FK S LLE G
Sbjct: 175 DLLSYHGEVYGGRLTDSISIEVTISGIMATPLRFKFMFSHRGYLLEIG 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,196,321
Number of Sequences: 27780
Number of extensions: 83894
Number of successful extensions: 329
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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