Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K24
(422 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 228 1e-60
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 228 1e-60
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 228 1e-60
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 77 4e-15
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 47 6e-06
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 47 6e-06
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 31 0.45
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.79
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 1.8
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 2.4
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 2.4
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 2.4
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 5.5
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 5.5
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 5.5
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 27 7.3
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 27 7.3
AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical... 27 7.3
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 26 9.7
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 26 9.7
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 26 9.7
AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical ... 26 9.7
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 26 9.7
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 228 bits (558), Expect = 1e-60
Identities = 105/137 (76%), Positives = 118/137 (86%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 186
GDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQISNGYTPVLDCH
Sbjct: 271 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCH 330
Query: 187 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 366
TAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRF
Sbjct: 331 TAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRF 390
Query: 367 AVRGMRQTVAVGVIKAV 417
AVR MRQTVAVGVIK+V
Sbjct: 391 AVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 228 bits (558), Expect = 1e-60
Identities = 105/137 (76%), Positives = 118/137 (86%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 186
GDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCH 364
Query: 187 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 366
TAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRF
Sbjct: 365 TAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRF 424
Query: 367 AVRGMRQTVAVGVIKAV 417
AVR MRQTVAVGVIK+V
Sbjct: 425 AVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 228 bits (558), Expect = 1e-60
Identities = 105/137 (76%), Positives = 118/137 (86%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 186
GDNVGFNVKNVSVK++RRG V DSK +P + A F AQVI++NHPGQISNGYTPVLDCH
Sbjct: 305 GDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCH 364
Query: 187 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 366
TAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPLCVESF ++ PLGRF
Sbjct: 365 TAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRF 424
Query: 367 AVRGMRQTVAVGVIKAV 417
AVR MRQTVAVGVIK+V
Sbjct: 425 AVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 77.4 bits (182), Expect = 4e-15
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +1
Query: 7 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCH 186
GDN+ F +K + EL+ G++ + G F A+V+VL H I++GY+ VL
Sbjct: 397 GDNIKFKLKGIEENELQGGFIICSPDSLAKTGRV-FDAEVLVLEHRSIIASGYSCVLHIQ 455
Query: 187 TAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 366
+A + +D++TG+ + K +K + I+ L +P +E F+E+P LGRF
Sbjct: 456 SAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRF 513
Query: 367 AVRGMRQTVAVG-VIKAV 417
+R +T+A+G V+K V
Sbjct: 514 TLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 46.8 bits (106), Expect = 6e-06
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 112 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 291
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 292 AIVNLVPSKPLCVESFQEFPPLGRFAVRGMRQTVAVGVIKAV 417
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 46.8 bits (106), Expect = 6e-06
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +1
Query: 112 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDA 291
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 292 AIVNLVPSKPLCVESFQEFPPLGRFAVRGMRQTVAVGVIKAV 417
A+V + + +E+F LGR R T+A G+++ V
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 30.7 bits (66), Expect = 0.45
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 385 ASCHARRNDRGVGTPGRTPHTGAW 314
+SC +NDRG TP R+ +GAW
Sbjct: 15 SSCGYCKNDRGERTPARSAKSGAW 38
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.79
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 177 GLPHSPHSLQICRNQRESRPSYW*INR 257
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 209 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPP 316
LPK+ T V + TT+ P +PP +T PP
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPP 299
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 175 LDCHTAHIACKFAEIKEKVDRRTGKSTE 258
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 175 LDCHTAHIACKFAEIKEKVDRRTGKSTE 258
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 175 LDCHTAHIACKFAEIKEKVDRRTGKSTE 258
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 82 KNNPPRGAAD-FTAQVIVLNHP 144
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 82 KNNPPRGAAD-FTAQVIVLNHP 144
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 92 HPGELQTSQRKSLC*ITQVKYQTDTHLYWI 181
H G + ++ SLC +T Y+ +LYWI
Sbjct: 311 HNGSSRFTELLSLCTVTNKYYEDVQYLYWI 340
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 211 AEIKEKVDRRTGKSTEDNPKS 273
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 418 SQPLLHRRRPSASCHARRNDRGVGTPGRTPHTGAWREPG 302
SQP + + + R+N GTP + GA RE G
Sbjct: 109 SQPQARQMSTQQAANLRKNAAAAGTPPKQAMQGASREQG 147
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 418 SQPLLHRRRPSASCHARRNDRGVGTPGRTPHTGAWREPG 302
SQP + + + R+N GTP + GA RE G
Sbjct: 109 SQPQARQMSTQQAANLRKNAAAAGTPPKQAMQGASREQG 147
>AC024746-12|AAF60401.1| 142|Caenorhabditis elegans Hypothetical
protein Y110A2AL.1 protein.
Length = 142
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 55 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQI 153
RR Y D P+GA DF AQ++ PG I
Sbjct: 64 RRHYF--DLHGMTPQGAVDFVAQIVEGRRPGYI 94
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 175 LDCHTAHIACKFAEIKEKVDRRTGKSTE 258
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 175 LDCHTAHIACKFAEIKEKVDRRTGKSTE 258
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 121 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKE 225
Q+++LNHP QI +L A C+F ++E
Sbjct: 1375 QILLLNHPNQIGKSTCYILMSDVAKY-CRFLVVEE 1408
>AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical
protein ZK994.1 protein.
Length = 554
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 69 NVTTAQFLDRYVFDVETN 16
N TTA FLD Y+F V T+
Sbjct: 384 NSTTATFLDDYIFHVPTS 401
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 175 LDCHTAHIACKFAEIKEKVDRRTGKSTE 258
L C ++C+ + +K+K + T KS E
Sbjct: 525 LQCQNEKLSCELSSLKDKHEEATSKSIE 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,064,436
Number of Sequences: 27780
Number of extensions: 257667
Number of successful extensions: 796
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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