Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K23
(409 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093696-1|AAH93696.1| 1173|Homo sapiens ubiquitination factor E... 165 5e-41
AL590639-5|CAI14687.1| 1173|Homo sapiens ubiquitination factor E... 165 5e-41
AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E... 165 5e-41
AL096841-2|CAI21860.1| 1173|Homo sapiens ubiquitination factor E... 165 5e-41
AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E... 165 5e-41
AF331520-1|AAK69622.1| 1173|Homo sapiens ubiquitin-fusion degrad... 165 5e-41
AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion degrad... 165 5e-41
AB028839-1|BAB40446.1| 1173|Homo sapiens homzygously deleted in ... 165 5e-41
AB014584-1|BAA31659.3| 1218|Homo sapiens KIAA0684 protein protein. 165 5e-41
AF091093-1|AAC72962.1| 186|Homo sapiens unknown protein. 151 9e-37
D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein. 85 1e-16
BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein. 85 1e-16
BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein. 85 1e-16
BC114929-1|AAI14930.1| 1038|Homo sapiens importin 7 protein. 30 2.6
AJ295844-1|CAC17609.1| 1010|Homo sapiens importin7 protein. 30 2.6
AF098799-1|AAC68903.1| 1038|Homo sapiens RanBP7/importin 7 protein. 30 2.6
AJ010170-1|CAA09031.1| 930|Homo sapiens gababr1 protein. 29 4.6
>BC093696-1|AAH93696.1| 1173|Homo sapiens ubiquitination factor E4B
protein.
Length = 1173
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 976 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1035
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1036 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1095
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1096 YSDAPDEFRDPLMD 1109
>AL590639-5|CAI14687.1| 1173|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1173
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 976 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1035
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1036 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1095
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1096 YSDAPDEFRDPLMD 1109
>AL590639-4|CAI14688.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 1105 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1164
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1165 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1224
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1225 YSDAPDEFRDPLMD 1238
>AL096841-2|CAI21860.1| 1173|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1173
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 976 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1035
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1036 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1095
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1096 YSDAPDEFRDPLMD 1109
>AL096841-1|CAI21859.1| 1302|Homo sapiens ubiquitination factor E4B
(UFD2 homolog, yeast) protein.
Length = 1302
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 1105 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1164
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1165 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1224
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1225 YSDAPDEFRDPLMD 1238
>AF331520-1|AAK69622.1| 1173|Homo sapiens ubiquitin-fusion degradation
protein 2 protein.
Length = 1173
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 976 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1035
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1036 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1095
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1096 YSDAPDEFRDPLMD 1109
>AF043117-1|AAD02233.1| 1302|Homo sapiens ubiquitin-fusion degradation
protein 2 protein.
Length = 1302
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 1105 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1164
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1165 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1224
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1225 YSDAPDEFRDPLMD 1238
>AB028839-1|BAB40446.1| 1173|Homo sapiens homzygously deleted in
neuroblastoma-1/UFD2 protein.
Length = 1173
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 976 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1035
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1036 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1095
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1096 YSDAPDEFRDPLMD 1109
>AB014584-1|BAA31659.3| 1218|Homo sapiens KIAA0684 protein protein.
Length = 1218
Score = 165 bits (401), Expect = 5e-41
Identities = 77/134 (57%), Positives = 98/134 (73%)
Frame = +3
Query: 6 REPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDS 185
++PFLR EL RLA+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD
Sbjct: 1021 QKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDC 1080
Query: 186 PLFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDE 365
F A+A D+RS+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +
Sbjct: 1081 ARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEID 1140
Query: 366 YADAPDEFRHPLMD 407
Y+DAPDEFR PLMD
Sbjct: 1141 YSDAPDEFRDPLMD 1154
>AF091093-1|AAC72962.1| 186|Homo sapiens unknown protein.
Length = 186
Score = 151 bits (366), Expect = 9e-37
Identities = 69/122 (56%), Positives = 89/122 (72%)
Frame = +3
Query: 42 LASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDSPLFHAALAADER 221
+A+MLNFNLQQLCGPKC++LKV PEKYG+EP++LL QL DIYL LD F A+A D+R
Sbjct: 1 MAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQR 60
Query: 222 SFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEYADAPDEFRHPL 401
S+ KELF+E ++ K+ IK+ IE FK LA+ +I N + +Y+DAPDEFR PL
Sbjct: 61 SYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPL 120
Query: 402 MD 407
MD
Sbjct: 121 MD 122
>D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein.
Length = 1075
Score = 84.6 bits (200), Expect = 1e-16
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 15 FLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHL-DSPL 191
F+ L +R+ SMLN+ LQ L GPK LKV+ ++ ++P++L+S + IYL+L D
Sbjct: 877 FVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEEN 936
Query: 192 FHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEYA 371
F A + D RS+ LF + +R+ K K I F LA+ +A QQ+ + YA
Sbjct: 937 FCATVPKDGRSYSPTLFAQ-TVRVLKKINKPGNMIMAFSNLAERIKSLADLQQQEEETYA 995
Query: 372 DAPDEFRHPLM 404
DA DEF P+M
Sbjct: 996 DACDEFLDPIM 1006
>BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 84.6 bits (200), Expect = 1e-16
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 15 FLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHL-DSPL 191
F+ L +R+ SMLN+ LQ L GPK LKV+ ++ ++P++L+S + IYL+L D
Sbjct: 868 FVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEEN 927
Query: 192 FHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEYA 371
F A + D RS+ LF + +R+ K K I F LA+ +A QQ+ + YA
Sbjct: 928 FCATVPKDGRSYSPTLFAQ-TVRVLKKINKPGNMIMAFSNLAERIKSLADLQQQEEETYA 986
Query: 372 DAPDEFRHPLM 404
DA DEF P+M
Sbjct: 987 DACDEFLDPIM 997
>BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 84.6 bits (200), Expect = 1e-16
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +3
Query: 15 FLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHL-DSPL 191
F+ L +R+ SMLN+ LQ L GPK LKV+ ++ ++P++L+S + IYL+L D
Sbjct: 868 FVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEEN 927
Query: 192 FHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEYA 371
F A + D RS+ LF + +R+ K K I F LA+ +A QQ+ + YA
Sbjct: 928 FCATVPKDGRSYSPTLFAQ-TVRVLKKINKPGNMIMAFSNLAERIKSLADLQQQEEETYA 986
Query: 372 DAPDEFRHPLM 404
DA DEF P+M
Sbjct: 987 DACDEFLDPIM 997
>BC114929-1|AAI14930.1| 1038|Homo sapiens importin 7 protein.
Length = 1038
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 216 ERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEY 368
E F+ + + AL L + C+ E+ + K A A Q+ +SNQ+K+ EY
Sbjct: 485 EVKFKSDQNLQTALELTRRCLIDDREMPV-KVEAAIALQVLISNQEKAKEY 534
>AJ295844-1|CAC17609.1| 1010|Homo sapiens importin7 protein.
Length = 1010
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 216 ERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEY 368
E F+ + + AL L + C+ E+ + K A A Q+ +SNQ+K+ EY
Sbjct: 457 EVKFKSDQNLQTALELTRRCLIDDREMPV-KVEAAIALQVLISNQEKAKEY 506
>AF098799-1|AAC68903.1| 1038|Homo sapiens RanBP7/importin 7 protein.
Length = 1038
Score = 30.3 bits (65), Expect = 2.6
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 216 ERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEY 368
E F+ + + AL L + C+ E+ + K A A Q+ +SNQ+K+ EY
Sbjct: 485 EVKFKSDQNLQTALELTRRCLIDDREMPV-KVEAAIALQVLISNQEKAKEY 534
>AJ010170-1|CAA09031.1| 930|Homo sapiens gababr1 protein.
Length = 930
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 102 KVRRPEKYGWEPRRLLSQLVDIYLHLDSPLFHAALAADERSFRKELFDEAAL 257
+V+ EK+GW+ + Q +++ LD A E +FR+ F + A+
Sbjct: 297 RVKLFEKWGWKKIATIQQTTEVFTSLDDLEERVKEAGIEITFRQSFFSDPAV 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,679,506
Number of Sequences: 237096
Number of extensions: 919420
Number of successful extensions: 2565
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2562
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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