Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K23
         (409 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical p...   114   3e-26
Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical pr...   114   3e-26
Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical pr...   114   3e-26
AL032626-13|CAA21532.1|  174|Caenorhabditis elegans Hypothetical...    31   0.32 
Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical pr...    26   9.1  

>Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical
            protein T05H10.5c protein.
          Length = 979

 Score =  114 bits (274), Expect = 3e-26
 Identities = 56/133 (42%), Positives = 80/133 (60%)
 Frame = +3

Query: 9    EPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDSP 188
            EPF    L +RLA+MLN NL QL G K   LKV+ P  YGWEPR  +S L+ IYL L+ P
Sbjct: 783  EPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIYLKLNMP 842

Query: 189  LFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEY 368
             F   +A DER++  E F  A   + K+ I   +++E F+ LA++  +   +  +  +EY
Sbjct: 843  AFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEY 902

Query: 369  ADAPDEFRHPLMD 407
             D P+EF+ P+MD
Sbjct: 903  DDVPEEFKDPIMD 915


>Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical protein
            T05H10.5b protein.
          Length = 984

 Score =  114 bits (274), Expect = 3e-26
 Identities = 56/133 (42%), Positives = 80/133 (60%)
 Frame = +3

Query: 9    EPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDSP 188
            EPF    L +RLA+MLN NL QL G K   LKV+ P  YGWEPR  +S L+ IYL L+ P
Sbjct: 788  EPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIYLKLNMP 847

Query: 189  LFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEY 368
             F   +A DER++  E F  A   + K+ I   +++E F+ LA++  +   +  +  +EY
Sbjct: 848  AFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEY 907

Query: 369  ADAPDEFRHPLMD 407
             D P+EF+ P+MD
Sbjct: 908  DDVPEEFKDPIMD 920


>Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical protein
            T05H10.5a protein.
          Length = 980

 Score =  114 bits (274), Expect = 3e-26
 Identities = 56/133 (42%), Positives = 80/133 (60%)
 Frame = +3

Query: 9    EPFLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKYGWEPRRLLSQLVDIYLHLDSP 188
            EPF    L +RLA+MLN NL QL G K   LKV+ P  YGWEPR  +S L+ IYL L+ P
Sbjct: 784  EPFRTPVLGERLAAMLNHNLSQLIGSKASELKVKDPRSYGWEPREFVSLLISIYLKLNMP 843

Query: 189  LFHAALAADERSFRKELFDEAALRLAKSCIKTATEIELFKALADNAYQIAVSNQQKSDEY 368
             F   +A DER++  E F  A   + K+ I   +++E F+ LA++  +   +  +  +EY
Sbjct: 844  AFVKYIAYDERTYSPEFFHNAIECMRKNSIVGFSQLESFEHLAEDVKKEYEAKAELEEEY 903

Query: 369  ADAPDEFRHPLMD 407
             D P+EF+ P+MD
Sbjct: 904  DDVPEEFKDPIMD 916


>AL032626-13|CAA21532.1|  174|Caenorhabditis elegans Hypothetical
           protein Y37D8A.14 protein.
          Length = 174

 Score = 31.1 bits (67), Expect = 0.32
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 105 VRRPEKYGWEPRRLLSQLVDIYLHLDSPLFHAALAADER 221
           + RPE  GWE R+ LS+L D  +  D  +  AAL A  R
Sbjct: 52  LNRPEIDGWEVRKALSELHDYDVIPDPKVVEAALRACRR 90


>Z78418-4|CAB01698.1|  710|Caenorhabditis elegans Hypothetical
           protein F25D7.5 protein.
          Length = 710

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
 Frame = +3

Query: 15  FLRTELVDRLASMLNFNLQQLCGPKCKNLKVRRPEKY------GWEPRRLLSQLVDIYLH 176
           FL+  ++D      +FN+   C     NLK+R+  ++      GW   +     V  ++ 
Sbjct: 389 FLQISIIDNRLESTSFNMDMRCRRPLYNLKIRQRIEHKEGVIDGWVAEKCRRNTVLCFIG 448

Query: 177 ---LDSPLFHAALAADERS 224
              L +      LAAD+RS
Sbjct: 449 VSLLSATWLLTILAADKRS 467


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,402,591
Number of Sequences: 27780
Number of extensions: 157489
Number of successful extensions: 552
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)