Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K23
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   5.4  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   5.4  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    20   9.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    20   9.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   9.4  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    20   9.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    20   9.4  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
          protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 74 LLQIEVEHRSEPVDQFGPEERLPR 3
          ++   VE   EP++ F  EER  R
Sbjct: 17 IMAAPVEDEFEPLEHFENEERADR 40


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 126 GWEPRRLLSQLVDIYLHLDSPL 191
           G   +RLL+ L+D Y  L+ P+
Sbjct: 21  GSHEKRLLNDLLDTYNVLERPV 42


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
          precursor protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 74 LLQIEVEHRSEPVDQFGPEERLPR 3
          ++   VE   EP++ F  EER  R
Sbjct: 17 IMAAPVEDEFEPLEHFENEERADR 40


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 192 FHAALAADERSFRKELFDEAALRLAKSCIKTATE 293
           FH    A    F  +LF  A  R  K+ +  ATE
Sbjct: 444 FHFKQIARAVKFTSKLFGRALSRRIKATVLFATE 477


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 187 LCFTPHSLQTRDRSGKN 237
           L  T H  Q RDR G N
Sbjct: 7   LLSTSHGWQIRDRIGDN 23


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 187 LCFTPHSLQTRDRSGKN 237
           L  T H  Q RDR G N
Sbjct: 12  LLSTSHGWQIRDRIGDN 28


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 74  LLQIEVEHRSEPVD 33
           LL  + E RSEPV+
Sbjct: 326 LLNFQEERRSEPVE 339


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -2

Query: 255 MPLHRTILSGTISRLQRVRRETEASLDVSICQRAG 151
           + +HR +   + +    V+R+T    DV + +R G
Sbjct: 133 LEIHRDLPGKSTTTTAEVKRDTINPEDVILIRRTG 167


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 187 LCFTPHSLQTRDRSGKN 237
           L  T H  Q RDR G N
Sbjct: 12  LLSTSHGWQIRDRIGDN 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,001
Number of Sequences: 438
Number of extensions: 2099
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)