Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K19
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 78 2e-15
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 78 2e-15
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 78 2e-15
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 58 2e-09
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 54 3e-08
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 50 4e-07
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 50 4e-07
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 50 4e-07
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 37 0.006
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 37 0.006
Z73972-8|CAI46601.1| 320|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z70311-2|CAA94374.1| 366|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 27 3.5
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 27 3.5
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 27 3.5
AL034365-4|CAA22262.1| 375|Caenorhabditis elegans Hypothetical ... 27 3.5
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 78.2 bits (184), Expect = 2e-15
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +1
Query: 112 VPPEFLIKHPLQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSE 291
VPPE L +HPLQN W+LW+ DRNK WE+ L V S F + D +++ S
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMV----SLF--DTVEDFWSLYNHIQSA 77
Query: 292 --LRQGHDYAVCKHGIRPMWEDDAR*MGGRWLI 384
L G DY + K GI+PMWED GGRWL+
Sbjct: 78 GGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLV 110
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 78.2 bits (184), Expect = 2e-15
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +1
Query: 112 VPPEFLIKHPLQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSE 291
VPPE L +HPLQN W+LW+ DRNK WE+ L V S F + D +++ S
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMV----SLF--DTVEDFWSLYNHIQSA 77
Query: 292 --LRQGHDYAVCKHGIRPMWEDDAR*MGGRWLI 384
L G DY + K GI+PMWED GGRWL+
Sbjct: 78 GGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLV 110
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 78.2 bits (184), Expect = 2e-15
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = +1
Query: 112 VPPEFLIKHPLQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSE 291
VPPE L +HPLQN W+LW+ DRNK WE+ L V S F + D +++ S
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMV----SLF--DTVEDFWSLYNHIQSA 77
Query: 292 --LRQGHDYAVCKHGIRPMWEDDAR*MGGRWLI 384
L G DY + K GI+PMWED GGRWL+
Sbjct: 78 GGLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLV 110
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 58.0 bits (134), Expect = 2e-09
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 130 IKHP---LQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSELRQ 300
I HP L+ W+ W+ +++RNK+WEE L V S L D PS L
Sbjct: 12 ISHPVYKLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKP----PSGLNP 67
Query: 301 GHDYAVCKHGIRPMWEDDAR*MGGRWLI 384
DY V + GI PMWE GGRWLI
Sbjct: 68 PSDYNVFRDGIEPMWEVPQNQNGGRWLI 95
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 54.4 bits (125), Expect = 3e-08
Identities = 31/83 (37%), Positives = 45/83 (54%)
Frame = +1
Query: 136 HPLQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSELRQGHDYA 315
+PL+ W+ W+ +++RNK+WE+ L +V +F + DA PS L DY
Sbjct: 12 YPLKRNWTWWYLNDERNKSWEDRLKKV---YTFNTVSEFWALYDA-IRPPSGLNALCDYN 67
Query: 316 VCKHGIRPMWEDDAR*MGGRWLI 384
V + I+PMWE GGRWLI
Sbjct: 68 VFRDDIQPMWEVPENSNGGRWLI 90
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 50.4 bits (115), Expect = 4e-07
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +1
Query: 136 HPLQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSELRQGHDYA 315
+PLQ WS WF ++DRN +W++ L +V +F +A PS L DY
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKV---YTFNTVPEFWAFYEA-ILPPSGLNDLCDYN 64
Query: 316 VCKHGIRPMWEDDAR*MGGRWLI 384
V + I+P WE GGRWLI
Sbjct: 65 VFRDDIQPKWEAPENWDGGRWLI 87
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 50.4 bits (115), Expect = 4e-07
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +1
Query: 136 HPLQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSELRQGHDYA 315
+PLQ WS WF ++DRN +W++ L +V +F +A PS L DY
Sbjct: 48 YPLQRNWSWWFLNDDRNASWQDRLKKV---YTFNTVPEFWAFYEA-ILPPSGLNDLCDYN 103
Query: 316 VCKHGIRPMWEDDAR*MGGRWLI 384
V + I+P WE GGRWLI
Sbjct: 104 VFRDDIQPKWEAPENWDGGRWLI 126
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 50.4 bits (115), Expect = 4e-07
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = +1
Query: 136 HPLQNTWSLWFYDNDRNKTWEENLIEVDHDLSFF*RTLLGDCTDA*SNVPSELRQGHDYA 315
+PLQ WS WF ++DRN +W++ L +V +F +A PS L DY
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKV---YTFNTVPEFWAFYEA-ILPPSGLNDLCDYN 64
Query: 316 VCKHGIRPMWEDDAR*MGGRWLI 384
V + I+P WE GGRWLI
Sbjct: 65 VFRDDIQPKWEAPENWDGGRWLI 87
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 36.7 bits (81), Expect = 0.006
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 283 PSELRQGHDYAVCKHGIRPMWEDDAR*MGGRWLI 384
P+E+ D K G++P+WED A GG+W+I
Sbjct: 80 PTEMCDKADIHFFKTGVKPVWEDPANCKGGKWII 113
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 36.7 bits (81), Expect = 0.006
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 283 PSELRQGHDYAVCKHGIRPMWEDDAR*MGGRWLI 384
P+E+ D K G++P+WED A GG+W+I
Sbjct: 80 PTEMCDKADIHFFKTGVKPVWEDPANCKGGKWII 113
>Z73972-8|CAI46601.1| 320|Caenorhabditis elegans Hypothetical
protein F15H10.9 protein.
Length = 320
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 298 DVTLTVRLTMHRYNLPTTSVKKNSNRGQLLLDSPPMFCFYRCRK 167
D+ + V + YNLP + KKN Q+LL+ CF+ R+
Sbjct: 224 DIGIMVGNSYQYYNLPDATFKKNGYVYQILLNE----CFFEVRE 263
>Z70311-2|CAA94374.1| 366|Caenorhabditis elegans Hypothetical
protein T25B9.2 protein.
Length = 366
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 370 HPFILHHLPTWAGYHACKRHSHVPDVTLTVRLTMHRYNLPTTSVKKNSNRGQLLLDSPP 194
H I HL ++ + KR +PDV + LT + PT K S RG + PP
Sbjct: 201 HGGISEHLTSFNQFSVFKRPLEIPDVGVLTDLTWADPD-PTEKGYKPSARGASFVFGPP 258
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 304 VPDVTLTVRLTMHRYNLPTTSVKKNSNRGQLLLDSP 197
+PDV + +R + R N+P ++V K + + ++SP
Sbjct: 551 LPDVQIAMRRGVRRENMPVSTVVKLKEKDREAVESP 586
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 370 HPFILHHLPTWAGYHACKRHSHVPDVTLTVRLTMHRYNLPTTS 242
HP + +P+++ HA + P+V + + Y++PTTS
Sbjct: 79 HPPPVQQVPSYSPPHAPPSYETYPEVYYPPHIICNPYDVPTTS 121
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 370 HPFILHHLPTWAGYHACKRHSHVPDVTLTVRLTMHRYNLPTTS 242
HP + +P+++ HA + P+V + + Y++PTTS
Sbjct: 85 HPPPVQQVPSYSPPHAPPSYETYPEVYYPPHIICNPYDVPTTS 127
>AL034365-4|CAA22262.1| 375|Caenorhabditis elegans Hypothetical
protein Y69E1A.4 protein.
Length = 375
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 370 HPFILHHLPTWAGYHACKRHSHVPDVTLTVRLTMHRYNLPTTSVKKNSNRGQLLLDSPP 194
H I HL ++ + KR +PDV + LT + PT K S RG + PP
Sbjct: 233 HGGISEHLTSFNQFSVFKRPLEIPDVGVLTDLTWADPD-PTEKGYKPSARGASFVFGPP 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,797,878
Number of Sequences: 27780
Number of extensions: 192812
Number of successful extensions: 428
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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