Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K17
(424 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 200 2e-51
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 199 4e-51
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 199 4e-51
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 199 4e-51
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 199 4e-51
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 199 4e-51
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 199 4e-51
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 199 4e-51
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 199 4e-51
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 168 8e-42
X83394-1|CAA58313.1| 366|Homo sapiens HLA-C alpha chain protein. 32 0.69
U09853-1|AAA50217.1| 366|Homo sapiens HLA-Cw7 protein. 32 0.69
M28207-1|AAA53259.1| 290|Homo sapiens MHC class I lymphocyte an... 32 0.69
M11886-1|AAA52665.1| 342|Homo sapiens transplantation antigen p... 32 0.69
D83957-1|BAA22206.1| 366|Homo sapiens HLA class I antigen protein. 32 0.69
D49819-1|BAA08625.1| 366|Homo sapiens HLA-Cw*0702 protein. 32 0.69
D49552-1|BAA08500.1| 366|Homo sapiens HLA-Cw*0704 protein. 32 0.69
D38526-1|BAA07531.1| 366|Homo sapiens HLA-Cw*0702 protein. 32 0.69
DQ983641-1|ABI99472.1| 366|Homo sapiens MHC class I antigen pro... 32 0.69
DQ359691-1|ABD60574.1| 366|Homo sapiens MHC class I antigen pro... 32 0.69
BC033293-1|AAH33293.1| 366|Homo sapiens major histocompatibilit... 32 0.69
BC007814-1|AAH07814.2| 365|Homo sapiens HLA-C protein protein. 32 0.69
BA000025-55|BAB63310.1| 366|Homo sapiens HLA-C protein. 32 0.69
AY929155-1|AAX98239.1| 366|Homo sapiens MHC class I antigen pro... 32 0.69
AY714373-1|AAU14145.1| 366|Homo sapiens MHC class I antigen pre... 32 0.69
AY619989-1|AAT41622.1| 366|Homo sapiens MHC class I antigen pre... 32 0.69
AY603356-1|AAV39503.1| 365|Homo sapiens MHC class I antigen pro... 32 0.69
AY509618-1|AAR99594.1| 366|Homo sapiens MHC class I antigen pre... 32 0.69
AY509615-1|AAR99591.1| 366|Homo sapiens MHC class I antigen pre... 32 0.69
AY162385-1|AAN84536.1| 67|Homo sapiens MHC class I antigen pro... 32 0.69
AY064404-1|AAL49978.1| 366|Homo sapiens MHC class I antigen pro... 32 0.69
AM749670-1|CAO78194.1| 365|Homo sapiens MHC class I antigen pro... 32 0.69
AM748047-1|CAO00838.1| 365|Homo sapiens MHC class I antigen pro... 32 0.69
AM696284-1|CAM90595.1| 366|Homo sapiens MHC class I antigen pro... 32 0.69
AL671883-3|CAI18144.1| 366|Homo sapiens major histocompatibilit... 32 0.69
AL662833-16|CAI17409.1| 366|Homo sapiens major histocompatibili... 32 0.69
AJ971029-1|CAI94871.1| 366|Homo sapiens MHC class I antigen pro... 32 0.69
AJ293017-1|CAC04322.1| 366|Homo sapiens human leucocyte antigen... 32 0.69
AJ293016-1|CAC04321.1| 366|Homo sapiens human leucocyte antigen... 32 0.69
AJ291815-1|CAC19191.1| 366|Homo sapiens MHC class I antigen pro... 32 0.69
AJ010749-1|CAA09341.1| 366|Homo sapiens HLA class I antigen pro... 32 0.69
AK127658-1|BAC87076.1| 626|Homo sapiens protein ( Homo sapiens ... 31 1.2
AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein. 31 1.2
AY233979-1|AAO84019.1| 366|Homo sapiens MHC class I antigen pro... 31 1.6
AF509727-1|AAP30863.1| 366|Homo sapiens MHC class I antigen pro... 31 1.6
X97321-1|CAA65986.1| 366|Homo sapiens HLA-C protein protein. 29 4.9
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 200 bits (488), Expect = 2e-51
Identities = 94/135 (69%), Positives = 105/135 (77%)
Frame = +3
Query: 18 ARMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 197
A MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VH
Sbjct: 8 AAMSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVH 67
Query: 198 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 377
SRAR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH
Sbjct: 68 SRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH 127
Query: 378 LYHSLCMKAKGNVFK 422
+YHSL +K KGNVFK
Sbjct: 128 MYHSLYLKVKGNVFK 142
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 199 bits (485), Expect = 4e-51
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +3
Query: 24 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 203
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 204 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 383
AR RKNT ARRKGRH G GKR+GTANARMP+K W +KKIDRH+Y
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 384 HSLCMKAKGNVFK 422
HSL +K KGNVFK
Sbjct: 121 HSLYLKVKGNVFK 133
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 168 bits (408), Expect = 8e-42
Identities = 78/114 (68%), Positives = 86/114 (75%)
Frame = +3
Query: 81 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 260
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 261 KRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLCMKAKGNVFK 422
KR+GTANARMP+K W +KKIDRH+YHSL +K KGNVFK
Sbjct: 61 KRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFK 114
>X83394-1|CAA58313.1| 366|Homo sapiens HLA-C alpha chain protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>U09853-1|AAA50217.1| 366|Homo sapiens HLA-Cw7 protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>M28207-1|AAA53259.1| 290|Homo sapiens MHC class I lymphocyte
antigen protein.
Length = 290
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 237 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 279
>M11886-1|AAA52665.1| 342|Homo sapiens transplantation antigen
protein.
Length = 342
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 289 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 331
>D83957-1|BAA22206.1| 366|Homo sapiens HLA class I antigen protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>D49819-1|BAA08625.1| 366|Homo sapiens HLA-Cw*0702 protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>D49552-1|BAA08500.1| 366|Homo sapiens HLA-Cw*0704 protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>D38526-1|BAA07531.1| 366|Homo sapiens HLA-Cw*0702 protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>DQ983641-1|ABI99472.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>DQ359691-1|ABD60574.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>BC033293-1|AAH33293.1| 366|Homo sapiens major histocompatibility
complex, class I, C protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>BC007814-1|AAH07814.2| 365|Homo sapiens HLA-C protein protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 312 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 354
>BA000025-55|BAB63310.1| 366|Homo sapiens HLA-C protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY929155-1|AAX98239.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY714373-1|AAU14145.1| 366|Homo sapiens MHC class I antigen
precusor protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY619989-1|AAT41622.1| 366|Homo sapiens MHC class I antigen
precusor protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY603356-1|AAV39503.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY509618-1|AAR99594.1| 366|Homo sapiens MHC class I antigen
precursor protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY509615-1|AAR99591.1| 366|Homo sapiens MHC class I antigen
precursor protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AY162385-1|AAN84536.1| 67|Homo sapiens MHC class I antigen
protein.
Length = 67
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 14 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 56
>AY064404-1|AAL49978.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AM749670-1|CAO78194.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AM748047-1|CAO00838.1| 365|Homo sapiens MHC class I antigen
protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AM696284-1|CAM90595.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AL671883-3|CAI18144.1| 366|Homo sapiens major histocompatibility
complex, class I, C protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AL662833-16|CAI17409.1| 366|Homo sapiens major histocompatibility
complex, class I, C protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ971029-1|CAI94871.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ293017-1|CAC04322.1| 366|Homo sapiens human leucocyte antigen C
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ293016-1|CAC04321.1| 366|Homo sapiens human leucocyte antigen C
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ291815-1|CAC19191.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AJ010749-1|CAA09341.1| 366|Homo sapiens HLA class I antigen
protein.
Length = 366
Score = 32.3 bits (70), Expect = 0.69
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS + C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQ 355
>AK127658-1|BAC87076.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ45756 fis, clone MESAN2009156. ).
Length = 626
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 272 TSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 105
T P++K S + LCV AN + +D NW D + ++ L G+ I + L
Sbjct: 413 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 466
>AB082533-1|BAC02711.1| 764|Homo sapiens KIAA2002 protein protein.
Length = 764
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 272 TSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDL 105
T P++K S + LCV AN + +D NW D + ++ L G+ I + L
Sbjct: 183 TEPISKDLQKSMESSLCVMANPTYDIDPNW--DASSAGSSISYELKGLDIESYDSL 236
>AY233979-1|AAO84019.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQVACSNSAQ 355
>AF509727-1|AAP30863.1| 366|Homo sapiens MHC class I antigen
protein.
Length = 366
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V + C +K+ G KG CS C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQVACSNSAQ 355
>X97321-1|CAA65986.1| 366|Homo sapiens HLA-C protein protein.
Length = 366
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 232 AGKDVTVAL-VRGEVQLMLECHKKNYGFKGKGCSVSCCLNTEQ 357
AG V V L V G V C +K+ G KG CS C N+ Q
Sbjct: 313 AGLAVLVVLAVLGAVVTAKMCRRKSSGGKGGSCSQVACSNSAQ 355
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,275,817
Number of Sequences: 237096
Number of extensions: 1189444
Number of successful extensions: 2502
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2492
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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