Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K15
         (365 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031687-1|CAB51587.2|  828|Homo sapiens cadherin-like 22 protein.     29   3.5  
AF035300-1|AAB88183.1|  380|Homo sapiens protein ( Homo sapiens ...    29   3.5  
BC045113-1|AAH45113.1|  522|Homo sapiens LRRTM1 protein protein.       28   8.0  
AY358310-1|AAQ88677.1|  522|Homo sapiens DFLL675 protein.              28   8.0  
AY182024-1|AAO67545.1|  522|Homo sapiens leucine-rich repeat tra...    28   8.0  
AK056644-1|BAB71240.1|  522|Homo sapiens protein ( Homo sapiens ...    28   8.0  

>AL031687-1|CAB51587.2|  828|Homo sapiens cadherin-like 22 protein.
          Length = 828

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
 Frame = -2

Query: 244 KTYARDIAP-PAASLGTLHDGSSGT-RDF 164
           +TYA + A  PAASL +LH GSSG+ +DF
Sbjct: 771 QTYAFEGADSPAASLSSLHSGSSGSEQDF 799


>AF035300-1|AAB88183.1|  380|Homo sapiens protein ( Homo sapiens
           clone 23663 mRNA, partial cds. ).
          Length = 380

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
 Frame = -2

Query: 244 KTYARDIAP-PAASLGTLHDGSSGT-RDF 164
           +TYA + A  PAASL +LH GSSG+ +DF
Sbjct: 323 QTYAFEGADSPAASLSSLHSGSSGSEQDF 351


>BC045113-1|AAH45113.1|  522|Homo sapiens LRRTM1 protein protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 250 SRKTYARDIAPPAASLGTLHDGSSGTRD 167
           S  T   D+ PPA+S  TL DG  G  D
Sbjct: 376 SAVTNRSDLGPPASSATTLADGGEGQHD 403


>AY358310-1|AAQ88677.1|  522|Homo sapiens DFLL675 protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 250 SRKTYARDIAPPAASLGTLHDGSSGTRD 167
           S  T   D+ PPA+S  TL DG  G  D
Sbjct: 376 SAVTNRSDLGPPASSATTLADGGEGQHD 403


>AY182024-1|AAO67545.1|  522|Homo sapiens leucine-rich repeat
           transmembrane neuronal 1 protein protein.
          Length = 522

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 250 SRKTYARDIAPPAASLGTLHDGSSGTRD 167
           S  T   D+ PPA+S  TL DG  G  D
Sbjct: 376 SAVTNRSDLGPPASSATTLADGGEGQHD 403


>AK056644-1|BAB71240.1|  522|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32082 fis, clone OCBBF2000231, weakly similar to
           PHOSPHOLIPASE A2 INHIBITOR SUBUNIT B PRECURSOR. ).
          Length = 522

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 250 SRKTYARDIAPPAASLGTLHDGSSGTRD 167
           S  T   D+ PPA+S  TL DG  G  D
Sbjct: 376 SAVTNRSDLGPPASSATTLADGGEGQHD 403


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,112,042
Number of Sequences: 237096
Number of extensions: 766608
Number of successful extensions: 1033
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)