Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K10
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024882-5|AAF60932.1|  666|Caenorhabditis elegans Hypothetical ...    32   0.17 
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li...    29   1.6  
Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical p...    27   5.0  
Z54281-4|CAA91049.1|  199|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U67953-5|AAL13330.2|  287|Caenorhabditis elegans Male abnormal p...    27   5.0  
AY742796-1|AAW59416.1|  287|Caenorhabditis elegans MAB-7 protein.      27   5.0  
AF016424-4|AAT68893.1|  152|Caenorhabditis elegans Hypothetical ...    27   6.5  
AF016424-3|AAB65330.1|  251|Caenorhabditis elegans Hypothetical ...    27   6.5  
AC084153-2|AAK84597.1|  340|Caenorhabditis elegans Sphingomyelin...    26   8.7  

>AC024882-5|AAF60932.1|  666|Caenorhabditis elegans Hypothetical
           protein Y9C9A.8 protein.
          Length = 666

 Score = 31.9 bits (69), Expect = 0.17
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 306 LLIVPFLYSLLFVADVFGVTSETFIYLVTFF 214
           ++ + F    LF A VFG+  E F +LVTFF
Sbjct: 182 MIFLFFPIGALFTAPVFGINMEKFSFLVTFF 212


>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
           protein F31D5.5 protein.
          Length = 1788

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 319 PLFQLVDCSI-LILFIVCCRCVWSYVRDFHISCDVLCVLELLDIN*QYKTQ 170
           P   ++ C+  L+LF  C R V + V DF    D +C  +   +   Y+TQ
Sbjct: 330 PEISILGCNAGLLLFDTCLRTVTNPVIDFEYYDDTVCSCQGNQVTCDYQTQ 380


>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
           protein MTH-1 protein.
          Length = 1757

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 319 PLFQLVDCSI-LILFIVCCRCVWSYVRDFHISCDVLCVLELLDIN*QYKTQ 170
           P   ++ C+  L+LF  C R V + V DF    D +C  +   +   Y+TQ
Sbjct: 299 PEISILGCNAGLLLFDTCLRTVTNPVIDFEYYDDTVCSCQGNQVTCDYQTQ 349


>Z78065-9|CAI79172.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -3

Query: 331 ISTIPLFQLVDCSILILFIVCCRCVWSYVRDFHISCDVLCVLELLDIN*QYKTQ*TFSHF 152
           IS+  L  LV   +   F+V C  +WS  +   +    L  + +  I   + TQ TFS F
Sbjct: 6   ISSFVLSSLVSTILTGGFLVLCFILWSRFKQVRLKSSCLLCIRVQMILFWFLTQLTFSVF 65


>Z78064-11|CAI79210.1|  273|Caenorhabditis elegans Hypothetical
           protein F57B1.8 protein.
          Length = 273

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -3

Query: 331 ISTIPLFQLVDCSILILFIVCCRCVWSYVRDFHISCDVLCVLELLDIN*QYKTQ*TFSHF 152
           IS+  L  LV   +   F+V C  +WS  +   +    L  + +  I   + TQ TFS F
Sbjct: 6   ISSFVLSSLVSTILTGGFLVLCFILWSRFKQVRLKSSCLLCIRVQMILFWFLTQLTFSVF 65


>Z54281-4|CAA91049.1|  199|Caenorhabditis elegans Hypothetical
           protein F46C5.7 protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 16  RLAALVHSKRFPFSIRGF*CKLAKLFLSDCIVVAVPMRL*FVTVIQNVKMFIEFY 180
           R  A V+     FSI    C  A+L   DC V+   M    +     V +++EFY
Sbjct: 27  RRTAFVYKCELAFSILILFCAFAELIFYDCFVIFFLM---IIASFVFVLLYLEFY 78


>U67953-5|AAL13330.2|  287|Caenorhabditis elegans Male abnormal
           protein 7 protein.
          Length = 287

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 99  RLYCGCSTYAFVICYCYSKCENVY 170
           +L C C+T  ++  YC+ KC N+Y
Sbjct: 53  KLSCTCAT-GWMGRYCHRKCRNIY 75


>AY742796-1|AAW59416.1|  287|Caenorhabditis elegans MAB-7 protein.
          Length = 287

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 99  RLYCGCSTYAFVICYCYSKCENVY 170
           +L C C+T  ++  YC+ KC N+Y
Sbjct: 53  KLSCTCAT-GWMGRYCHRKCRNIY 75


>AF016424-4|AAT68893.1|  152|Caenorhabditis elegans Hypothetical
           protein F39G3.5b protein.
          Length = 152

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 330 YQRFHFFSLLIVPFLYSLLFVADV-FGVTSETFIYLVTFFAYWNY*TSTNS 181
           Y+ + + + +I   L++ L +  +  G+T+ T I + T  A WN  TS +S
Sbjct: 86  YRLYRYDAKIISKLLHTALHIIAIGLGITALTVIIMSTNNAGWNNFTSVHS 136


>AF016424-3|AAB65330.1|  251|Caenorhabditis elegans Hypothetical
           protein F39G3.5a protein.
          Length = 251

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -1

Query: 330 YQRFHFFSLLIVPFLYSLLFVADV-FGVTSETFIYLVTFFAYWNY*TSTNS 181
           Y+ + + + +I   L++ L +  +  G+T+ T I + T  A WN  TS +S
Sbjct: 86  YRLYRYDAKIISKLLHTALHIIAIGLGITALTVIIMSTNNAGWNNFTSVHS 136


>AC084153-2|AAK84597.1|  340|Caenorhabditis elegans Sphingomyelin
           synthase protein 3 protein.
          Length = 340

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 299 LFHSYTLYCLLQMCLELRQRLSY 231
           +F  Y  YC + MC+E R+ + Y
Sbjct: 241 VFRMYHAYCEVDMCMERRKSILY 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,836,031
Number of Sequences: 27780
Number of extensions: 141531
Number of successful extensions: 461
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)