Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K08
(264 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0570 - 4205739-4205776,4205846-4205897,4205939-4206067,420... 54 1e-08
04_01_0160 + 1830671-1830779,1830898-1830971,1831374-1831671,183... 31 0.17
03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,654... 29 0.39
03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574 28 0.89
12_01_0125 - 946480-947242,947283-947374,947462-947680,948059-94... 27 2.7
11_01_0115 - 889159-889921,889962-890053,890141-890359,890738-89... 27 2.7
12_01_0059 + 494876-494924,496060-496211,496344-496531,496971-49... 26 4.8
10_08_0036 + 14325793-14326457,14326610-14328035 26 4.8
09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181... 26 4.8
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 26 4.8
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 26 4.8
03_01_0210 + 1652040-1652186,1652446-1652853 25 6.3
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 25 8.3
06_03_0492 - 21386587-21386700,21387471-21387599,21387715-213877... 25 8.3
05_01_0597 + 5363049-5363429,5363559-5363715,5364390-5364757 25 8.3
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 25 8.3
04_03_0295 - 14033864-14033977,14034485-14034520 25 8.3
03_04_0109 + 17354914-17355250,17355812-17355903 25 8.3
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536... 25 8.3
02_02_0381 + 9573651-9574174,9574271-9574583 25 8.3
02_02_0380 + 9568775-9569250,9569360-9569672 25 8.3
>03_01_0570 -
4205739-4205776,4205846-4205897,4205939-4206067,
4206183-4206258,4206360-4206412,4206494-4206555,
4206624-4206734,4206813-4206979,4207089-4207268,
4207598-4207687,4207773-4207921,4208367-4208501,
4208575-4208630,4208790-4208823,4209409-4209519
Length = 480
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 127 EEQNDPVEKTAFTQLVNGQVQSRINRPGLLFSSTSWTPDEDFSILM 264
E++ + T FT V+G++ + NRP L+ SSTSWTPDEDFSIL+
Sbjct: 217 EKEVEDRNTTVFTSWVDGEIFLKPNRPALVVSSTSWTPDEDFSILL 262
>04_01_0160 +
1830671-1830779,1830898-1830971,1831374-1831671,
1831900-1832867,1833504-1833716,1834034-1834237,
1835063-1835104
Length = 635
Score = 30.7 bits (66), Expect = 0.17
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -2
Query: 254 LKSSSGVQLVLLNNKP-GLLILDCTWPFTSCVNAVFSTGSFCSSKYLLENSGYWFPILRN 78
+K G Q++ L N+ L DC P + +A+ + S + + SGY R
Sbjct: 40 MKCKDGTQIMSLANEDVSNLASDCQEPPSESNHAISHGSNTDSKEEMSSGSGY----RRQ 95
Query: 77 QACFSSKVREW 45
Q+CFSS W
Sbjct: 96 QSCFSSSTCSW 106
>03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,
6541815-6543215,6543268-6543357,6543800-6544515,
6545549-6545707,6545877-6546186,6546794-6546861,
6547354-6547896
Length = 1247
Score = 29.5 bits (63), Expect = 0.39
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 40 IFHSLTLEEKHAWFLKIGNQYPEFSSKYFEEQND 141
+F L +HA L++G ++PE + + +E++D
Sbjct: 955 VFKQLVNRRQHAKLLRLGEEFPEELANFLKERDD 988
>03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574
Length = 602
Score = 28.3 bits (60), Expect = 0.89
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 31 PPKIFHSLTLEEKHAWFLKIGNQYPEFSSKYFEEQNDPVEKT 156
P +F S ++ WFL + EF+ +E N P EK+
Sbjct: 459 PVDLFWSTRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKS 500
>12_01_0125 -
946480-947242,947283-947374,947462-947680,948059-949156
Length = 723
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 64 EKHAWFLKIGNQYPEFSSKYFEEQN 138
E H WFLK ++ + FE+QN
Sbjct: 629 EMHTWFLKFVDEAMDLGFHLFEDQN 653
>11_01_0115 -
889159-889921,889962-890053,890141-890359,890738-891835
Length = 723
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 64 EKHAWFLKIGNQYPEFSSKYFEEQN 138
E H WFLK ++ + FE+QN
Sbjct: 629 EMHTWFLKFVDEAMDLGFHLFEDQN 653
>12_01_0059 +
494876-494924,496060-496211,496344-496531,496971-497027,
497123-497282,497389-497457,497712-497837,497972-498091
Length = 306
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 58 LEEKHAWFLKIGNQYPEFSSKYFEEQ 135
L+ HAW K ++ PEF+ + F ++
Sbjct: 206 LKNGHAWHFKTYDKRPEFARRLFRQK 231
>10_08_0036 + 14325793-14326457,14326610-14328035
Length = 696
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 254 LKSSSGVQLVL-LNNKPGLLILDCTWPFTSCVNAVFSTG 141
LK + ++V+ N G+L DC W F C+++ +G
Sbjct: 507 LKDADSFEIVIAFVNSEGMLAYDCVWKF--CISSTPRSG 543
>09_06_0230 + 21717225-21717301,21717888-21717972,21718045-21718165,
21718244-21718368,21718940-21718984,21719082-21719345,
21720067-21720111,21720182-21720212,21721644-21721693,
21722433-21724310,21724406-21724564,21724821-21724939,
21726917-21727059,21727670-21727735,21728184-21728317,
21728454-21728591,21728927-21729186,21729295-21729406,
21730727-21730909
Length = 1344
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 176 FTSCVNAVFSTGSFC-SSKYLLENSGYWFPILRNQACFSSKVREWNI 39
F+S NA + G+ + K+L G W I+ + C + +RE+ +
Sbjct: 1204 FSSKGNATINGGTISVNQKFLDSKVGIWENIIDMRTCLQNMLREYTL 1250
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 97 QYPEFSSKYFEEQNDPVEKTAFTQLVNGQVQSRINRPGL 213
+Y EF K F E DP+ T FT + +S + PG+
Sbjct: 364 EYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGM 402
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 97 QYPEFSSKYFEEQNDPVEKTAFTQLVNGQVQSRINRPGL 213
+Y EF K F E DP+ T FT + +S + PG+
Sbjct: 614 EYNEFYKKAFNEFLDPLAYTHFTTEGEVEFRSVLYIPGM 652
>03_01_0210 + 1652040-1652186,1652446-1652853
Length = 184
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 207 RPINSRLHLAIHQLCKCCLLYWIILLFKI 121
RP +L A + CCL+ W++ L K+
Sbjct: 20 RPTVLKLEFATSKRLSCCLVPWLLPLKKV 48
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 133 QNDPVEKTAFTQLVNGQVQSRINRPGLLFSSTSWTPDEDFSI 258
Q+D V T + GQ+ S I+ FSS S D S+
Sbjct: 300 QDDAVTPTVTDSIFGGQLSSHISCKCCSFSSVSHVAFHDLSV 341
>06_03_0492 -
21386587-21386700,21387471-21387599,21387715-21387790,
21387898-21387950,21388034-21388095,21388164-21388274,
21388361-21388527,21388804-21388869,21389416-21389505,
21389592-21389740,21390182-21390316,21390399-21390454,
21390630-21390663,21391908-21392018
Length = 450
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 226 TSWTPDEDFSILM 264
+S TPDEDFSIL+
Sbjct: 212 SSLTPDEDFSILL 224
>05_01_0597 + 5363049-5363429,5363559-5363715,5364390-5364757
Length = 301
Score = 25.0 bits (52), Expect = 8.3
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +1
Query: 67 KHAWFLKIGNQYPEFSSKYF 126
+HAW + +G+ +P+ S+ F
Sbjct: 265 QHAWLMVLGSYHPKIQSEMF 284
>04_03_0985 -
21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 258 YAKVFIRCPTSTAE*QTRPINSRLHLAIHQLCKCCL 151
+A+ F CP E +T P++S +++ + CL
Sbjct: 762 FARYFGDCPVINVEGRTHPVSSHFLEDVYEKMEYCL 797
>04_03_0295 - 14033864-14033977,14034485-14034520
Length = 49
Score = 25.0 bits (52), Expect = 8.3
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -3
Query: 82 ETKHVFLLKLGNGIFLADGHRVWLLLV 2
+ H F +G+G+ +A R+W ++V
Sbjct: 21 DAPHKFAATIGDGVSVAKAQRLWTVVV 47
>03_04_0109 + 17354914-17355250,17355812-17355903
Length = 142
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 199 NRPGLLFSSTSWTPDE 246
NRPG SSTSW D+
Sbjct: 21 NRPGRASSSTSWIEDK 36
>03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,
5368467-5368577,5368997-5369068,5369719-5369737,
5369838-5371142,5371317-5371397,5372441-5372604,
5373363-5373466,5373537-5373628,5374079-5374216,
5374370-5374426,5374820-5375046
Length = 1713
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 76 WFLKIGNQYPEFSSKYFEEQNDPVEKTAFT 165
W L+ + S K FEE D ++ T F+
Sbjct: 1013 WLLRSVQELVSLSHKIFEEHTDEMKNTIFS 1042
>02_02_0381 + 9573651-9574174,9574271-9574583
Length = 278
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 164 VNAVFSTGSFCSSKYLLENSGYWFPILRN 78
V V +TGS S + NS W P++RN
Sbjct: 199 VTNVATTGSIKSMDIMGSNSTDWMPMVRN 227
>02_02_0380 + 9568775-9569250,9569360-9569672
Length = 262
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 164 VNAVFSTGSFCSSKYLLENSGYWFPILRN 78
V V +TGS S + NS W P++RN
Sbjct: 183 VTNVATTGSIKSMDIMGSNSTDWMPMVRN 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,303,194
Number of Sequences: 37544
Number of extensions: 127649
Number of successful extensions: 357
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 14,793,348
effective HSP length: 66
effective length of database: 12,315,444
effective search space used: 258624324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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