Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K08
(264 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical pr... 50 3e-07
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical ... 26 3.2
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 26 4.2
Z50006-6|CAA90298.1| 334|Caenorhabditis elegans Hypothetical pr... 25 7.4
U22833-6|AAA64326.1| 162|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical pr... 25 9.8
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 25 9.8
U21321-10|AAG00048.2| 325|Caenorhabditis elegans T box family p... 25 9.8
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 25 9.8
>U00043-6|AAC77507.1| 487|Caenorhabditis elegans Hypothetical
protein T26A5.4 protein.
Length = 487
Score = 49.6 bits (113), Expect = 3e-07
Identities = 32/85 (37%), Positives = 44/85 (51%)
Frame = +1
Query: 10 ATTLYDRPPKIFHSLTLEEKHAWFLKIGNQYPEFSSKYFEEQNDPVEKTAFTQLVNGQVQ 189
A+T YDRPP T++E H +L++ + K E+ K++ NG VQ
Sbjct: 208 ASTFYDRPPT---DTTIQEIHDLYLRLSQKERILQGKD-EDSTILTHKSS-----NGVVQ 258
Query: 190 SRINRPGLLFSSTSWTPDEDFSILM 264
RP + SSTSWTPDE F IL+
Sbjct: 259 LLTTRPIVFLSSTSWTPDERFEILL 283
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 31 PPKIFH-SLTLEEKHAWFLKIGN-QYPEFSSKYFEEQNDPVEK 153
P + H + L E+ A LK N + +FS + FE +DP+EK
Sbjct: 102 PEVVSHVGMLLLEEMAKMLKSSNVKLKKFSVRLFETPSDPIEK 144
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 31 PPKIFH-SLTLEEKHAWFLKIGN-QYPEFSSKYFEEQNDPVEK 153
P + H + L E+ A LK N + +FS + FE +DP+EK
Sbjct: 32 PEVVSHVGMLLLEEMAKMLKSSNVKLKKFSVRLFETPSDPIEK 74
>AF045646-3|AAK29836.2| 432|Caenorhabditis elegans Hypothetical
protein F56B3.2a protein.
Length = 432
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 191 DCTWPFTSCVNA--VFSTGSFCSSKYLLENSGYWFPILRNQAC 69
DCT PF++CVN+ V TG+ + + F L Q+C
Sbjct: 131 DCTSPFSACVNSQCVCITGTIQMGSRCVAAANCPFGKLPGQSC 173
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 118 KYFEEQNDPVEKTAFTQLVNGQVQSRINRP 207
KY ++NDP +T+ + NG + + RP
Sbjct: 2343 KYVLQKNDPSSETSLSFSTNGNDEEDLERP 2372
>Z50006-6|CAA90298.1| 334|Caenorhabditis elegans Hypothetical
protein T07C5.5 protein.
Length = 334
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 233 QLVLLNNKPGLLILDCTWPFTSCVNAVFSTGSF 135
+L++++ K + L+CT P + V+ VFS SF
Sbjct: 90 KLLVMDTKRRDIFLNCTIPESLTVDEVFSRRSF 122
>U22833-6|AAA64326.1| 162|Caenorhabditis elegans Hypothetical
protein W02B3.7 protein.
Length = 162
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 156 CLLYWIILLFKIFT*EFRILVSNLKKPSM 70
CLLYW + +F + IL + + +PS+
Sbjct: 6 CLLYWFLSIFIVVVYYNEILTTPIIEPSV 34
>Z99169-2|CAB16307.1| 1334|Caenorhabditis elegans Hypothetical
protein C26H9A.2 protein.
Length = 1334
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 162 KCCLLYWIILLFKIFT*EFRILVSNLK 82
+C +L ++ ++FK+FT R SN K
Sbjct: 689 QCQMLEFVHIIFKVFTLSMRFEPSNAK 715
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 24.6 bits (51), Expect = 9.8
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 49 SLTLEEKHAWFLKIGNQYPEFSSKYFEEQNDPVEKTAFTQLVNGQ 183
S LE+K LK P+ + Y + ND V+KT F++L G+
Sbjct: 570 STLLEKKFKEELKTA--LPDRTVYYHPQMNDVVDKTDFSKLRFGE 612
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 79 FLKIGNQYPEFSSKYFEEQNDPVEKTAFTQLVNGQVQSRINRPGLL 216
FL+I ++P++ ++ND K T++ N V + +P +L
Sbjct: 320 FLEIVKKFPDYHFLIRADKNDKNTKDKATEISNVFVSDWLPQPAIL 365
>Z67755-4|CAA91757.1| 336|Caenorhabditis elegans Hypothetical
protein F54F7.4 protein.
Length = 336
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 177 IHQLCKCCLLYWIILLFKI 121
I LC+CC+ Y +IL+ I
Sbjct: 39 ILHLCQCCVSYLVILVASI 57
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 24.6 bits (51), Expect = 9.8
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -2
Query: 179 PFTSCVNAVFSTGSFCSSKYL 117
P++ C NA ++ +FC++ +L
Sbjct: 523 PYSMCPNATYTDKAFCAALFL 543
>U21321-10|AAG00048.2| 325|Caenorhabditis elegans T box family
protein 35 protein.
Length = 325
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 127 EEQNDPVEKTAFTQLVNGQVQSRINRPGLLFSSTSW---TPDEDF 252
+E+N P+E ++F Q + Q +++P L ST+ PD F
Sbjct: 223 QEENQPIENSSFHQSFSNQY---LSKPDLDLKSTTLLQIAPDHSF 264
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 179 PFTSCVNAVFSTGSFCSSKYLLENSG 102
P++ C NA + ++C+S L+NSG
Sbjct: 521 PYSMCPNATYIDKAYCAS-LALKNSG 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,359,278
Number of Sequences: 27780
Number of extensions: 116857
Number of successful extensions: 340
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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