Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K07
         (422 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   1.5  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    25   1.5  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   1.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   3.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   3.5  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
 Frame = -2

Query: 121 WHVVHNHAAR----VGDFFGPVLLSHI 53
           W   H H  R    +GD +GP LL H+
Sbjct: 333 WVERHKHVVRLVSAIGDTYGPALLLHM 359


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
 Frame = -2

Query: 121 WHVVHNHAAR----VGDFFGPVLLSHI 53
           W   H H  R    +GD +GP LL H+
Sbjct: 186 WVERHKHVVRLVSAIGDTYGPALLLHM 212


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
 Frame = -2

Query: 121 WHVVHNHAAR----VGDFFGPVLLSHI 53
           W   H H  R    +GD +GP LL H+
Sbjct: 333 WVERHKHVVRLVSAIGDTYGPALLLHM 359


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 21/77 (27%), Positives = 29/77 (37%)
 Frame = +3

Query: 48   CEIWLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKSNFLGDGVVMTFKYRTCLCQDYISVK 227
            C  W +   P         +WT    +  LI PKSNF            T + Q+   + 
Sbjct: 2335 CAGWYKDDIPDAIADTCNSVWTILS-NEGLIGPKSNFS----------MTAINQELRDLL 2383

Query: 228  EKYAKYLPHSAGRYAHK 278
             +YA +LP   G   HK
Sbjct: 2384 SEYASHLPAIIGALYHK 2400


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 21/77 (27%), Positives = 29/77 (37%)
 Frame = +3

Query: 48   CEIWLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKSNFLGDGVVMTFKYRTCLCQDYISVK 227
            C  W +   P         +WT    +  LI PKSNF            T + Q+   + 
Sbjct: 2336 CAGWYKDDIPDAIADTCNSVWTILS-NEGLIGPKSNFS----------MTAINQELRDLL 2384

Query: 228  EKYAKYLPHSAGRYAHK 278
             +YA +LP   G   HK
Sbjct: 2385 SEYASHLPAIIGALYHK 2401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,229
Number of Sequences: 2352
Number of extensions: 9292
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)