BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K04
(137 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein. 23 0.99
AJ000038-1|CAA03874.1| 73|Anopheles gambiae F1 protein protein. 23 0.99
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 22 3.0
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 22 3.0
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 21 5.3
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 21 5.3
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 21 5.3
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 21 5.3
AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding pr... 21 7.0
>Y17717-1|CAA76832.1| 101|Anopheles gambiae cE5 protein protein.
Length = 101
Score = 23.4 bits (48), Expect = 0.99
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 52 YVEQNFEQESLVPNSCS 2
Y E++F++ESL P+S S
Sbjct: 33 YDEEDFDEESLKPHSSS 49
>AJ000038-1|CAA03874.1| 73|Anopheles gambiae F1 protein protein.
Length = 73
Score = 23.4 bits (48), Expect = 0.99
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 52 YVEQNFEQESLVPNSCS 2
Y E++F++ESL P+S S
Sbjct: 33 YDEEDFDEESLKPHSSS 49
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 88 FKRFKCFCGPRAYVEQNFEQESLVPNSCS 2
+ R C G Y+E + VPN C+
Sbjct: 106 YTRGYCPSGKIIYIEPKGKHPECVPNQCA 134
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 23 AFLFKVLFNIGARATEALEAFK 88
A L L NIGA+ T ALE +
Sbjct: 104 ALLMAQLQNIGAQLTTALEELR 125
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 21.0 bits (42), Expect = 5.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3
Query: 132 VHAAQLVQHP 103
+H A++VQHP
Sbjct: 115 IHVARIVQHP 124
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 69 KHLKRLNAPK 98
KH RLNAPK
Sbjct: 573 KHADRLNAPK 582
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 69 KHLKRLNAPK 98
KH RLNAPK
Sbjct: 549 KHADRLNAPK 558
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein
protein.
Length = 1229
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -2
Query: 97 LGAFKRFKCFCGPRAYVEQNF 35
+G KRF GP + NF
Sbjct: 27 IGPLKRFSAVIGPNGSGKSNF 47
>AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding
protein AgamOBP38 protein.
Length = 336
Score = 20.6 bits (41), Expect = 7.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -2
Query: 121 PACPTSYALGAFKRFKCF 68
PA P GA+ F+C+
Sbjct: 115 PAPPADSCAGAYWSFRCY 132
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,556
Number of Sequences: 2352
Number of extensions: 1564
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 25
effective length of database: 505,179
effective search space used: 10103580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -