Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K04
         (137 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70767-1|CAA94808.1|   59|Homo sapiens ribosomal protein S4 prot...    30   1.2  
M58459-1|AAA63256.1|  263|Homo sapiens ribosomal protein S4Y iso...    30   1.2  
M58458-1|AAA63255.1|  263|Homo sapiens ribosomal protein S4X iso...    30   1.2  
CR456735-1|CAG33016.1|  263|Homo sapiens RPS4X protein.                30   1.2  
BC100906-1|AAI00907.1|  262|Homo sapiens RPS4Y1 protein protein.       30   1.2  
BC100905-1|AAI00906.1|  263|Homo sapiens ribosomal protein S4, Y...    30   1.2  
BC100904-1|AAI00905.1|  263|Homo sapiens RPS4X protein protein.        30   1.2  
BC100903-1|AAI00904.1|  263|Homo sapiens RPS4X protein protein.        30   1.2  
BC071662-1|AAH71662.1|  263|Homo sapiens ribosomal protein S4, X...    30   1.2  
BC010286-1|AAH10286.1|  263|Homo sapiens ribosomal protein S4, Y...    30   1.2  
BC000472-1|AAH00472.1|  263|Homo sapiens ribosomal protein S4, X...    30   1.2  
AK222594-1|BAD96314.1|  263|Homo sapiens ribosomal protein S4, Y...    30   1.2  
AK222479-1|BAD96199.1|  263|Homo sapiens ribosomal protein S4, X...    30   1.2  
AF497481-1|AAM18074.1|  263|Homo sapiens ribosomal protein S4 pr...    30   1.2  
AF041428-1|AAB96968.1|  263|Homo sapiens ribosomal protein s4 X ...    30   1.2  
AF041427-1|AAB96967.1|  263|Homo sapiens ribosomal protein s4 Y ...    30   1.2  

>Z70767-1|CAA94808.1|   59|Homo sapiens ribosomal protein S4
          protein.
          Length = 59

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>M58459-1|AAA63256.1|  263|Homo sapiens ribosomal protein S4Y
          isoform protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>M58458-1|AAA63255.1|  263|Homo sapiens ribosomal protein S4X
          isoform protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>CR456735-1|CAG33016.1|  263|Homo sapiens RPS4X protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>BC100906-1|AAI00907.1|  262|Homo sapiens RPS4Y1 protein protein.
          Length = 262

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 1  ARGPKKHLKRVAAPK 15


>BC100905-1|AAI00906.1|  263|Homo sapiens ribosomal protein S4,
          Y-linked 1 protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>BC100904-1|AAI00905.1|  263|Homo sapiens RPS4X protein protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>BC100903-1|AAI00904.1|  263|Homo sapiens RPS4X protein protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>BC071662-1|AAH71662.1|  263|Homo sapiens ribosomal protein S4,
          X-linked protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>BC010286-1|AAH10286.1|  263|Homo sapiens ribosomal protein S4,
          Y-linked 1 protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>BC000472-1|AAH00472.1|  263|Homo sapiens ribosomal protein S4,
          X-linked protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>AK222594-1|BAD96314.1|  263|Homo sapiens ribosomal protein S4,
          Y-linked 1 Y isoform variant protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>AK222479-1|BAD96199.1|  263|Homo sapiens ribosomal protein S4,
          X-linked X isoform variant protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>AF497481-1|AAM18074.1|  263|Homo sapiens ribosomal protein S4
          protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>AF041428-1|AAB96968.1|  263|Homo sapiens ribosomal protein s4 X
          isoform protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


>AF041427-1|AAB96967.1|  263|Homo sapiens ribosomal protein s4 Y
          isoform protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 54 ARGPQKHLKRLNAPK 98
          ARGP+KHLKR+ APK
Sbjct: 2  ARGPKKHLKRVAAPK 16


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,547,220
Number of Sequences: 237096
Number of extensions: 233435
Number of successful extensions: 429
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 76,859,062
effective HSP length: 26
effective length of database: 70,694,566
effective search space used: 1343196754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)