Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K04
         (137 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal prot...    33   0.055
BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p pro...    33   0.055
AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-P...    33   0.055
AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-P...    33   0.055
BT023810-1|AAZ66317.1|  388|Drosophila melanogaster RE24814p pro...    26   8.3  
AE014298-2075|AAF48402.1|  646|Drosophila melanogaster CG9509-PA...    26   8.3  

>D16257-1|BAA03786.1|  261|Drosophila melanogaster ribosomal protein
           S4 protein.
          Length = 261

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 54  ARGPQKHLKRLNAPKA 101
           ARGP+KHLKRL APKA
Sbjct: 2   ARGPKKHLKRLAAPKA 17


>BT011369-1|AAR96161.1|  261|Drosophila melanogaster RE57333p
           protein.
          Length = 261

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 54  ARGPQKHLKRLNAPKA 101
           ARGP+KHLKRL APKA
Sbjct: 2   ARGPKKHLKRLAAPKA 17


>AE014296-2240|AAF49846.1|  261|Drosophila melanogaster CG11276-PB,
           isoform B protein.
          Length = 261

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 54  ARGPQKHLKRLNAPKA 101
           ARGP+KHLKRL APKA
Sbjct: 2   ARGPKKHLKRLAAPKA 17


>AE014296-2239|AAF49847.1|  261|Drosophila melanogaster CG11276-PA,
           isoform A protein.
          Length = 261

 Score = 33.1 bits (72), Expect = 0.055
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 54  ARGPQKHLKRLNAPKA 101
           ARGP+KHLKRL APKA
Sbjct: 2   ARGPKKHLKRLAAPKA 17


>BT023810-1|AAZ66317.1|  388|Drosophila melanogaster RE24814p
           protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 60  GPQKHLKRLNAPKA*DVGQAGRRVR 134
           GP KHLK L  P   D+   GR ++
Sbjct: 75  GPSKHLKELGIPVKLDLPGVGRNLQ 99


>AE014298-2075|AAF48402.1|  646|Drosophila melanogaster CG9509-PA
           protein.
          Length = 646

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 60  GPQKHLKRLNAPKA*DVGQAGRRVR 134
           GP KHLK L  P   D+   GR ++
Sbjct: 333 GPSKHLKELGIPVKLDLPGVGRNLQ 357


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,139,940
Number of Sequences: 53049
Number of extensions: 74798
Number of successful extensions: 117
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 24,988,368
effective HSP length: 26
effective length of database: 23,609,094
effective search space used: 448572786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)