Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_K03
         (384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   1.7  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    24   2.2  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   3.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   3.8  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   3.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   5.1  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    22   8.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   8.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    22   8.9  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 341 NKRNTAKDPKMQREPRAYRVLYQVVSQLSPCARIVSGPDINKAMKLQHEL 192
           +K    +D   Q EP  +   YQ+  Q    AR+    D NK   + +EL
Sbjct: 338 SKDQHKQDLPEQLEPHGFGPAYQIRKQQWEGARVPMERDANKLQFIVNEL 387


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 198 RAPIAINLFVCPFVVPSSRTSLNDTCPVIGRAGARNDTN 82
           ++ IA ++    ++  +SR S+N +C  I  +   NDTN
Sbjct: 17  KSSIASSVLARHYINNASR-SINSSCAQINESDKANDTN 54


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 218  YLCQGQTRCGHTATVGKLLDTVLDTREALFA 310
            Y  +G+   GH  T+ +    VLDTR    A
Sbjct: 1095 YYKEGELDLGHRLTLSRKTLNVLDTRRKSMA 1125


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 118 SHRPGGCKKRYKSLR 74
           SH+PGG  KR +S++
Sbjct: 732 SHKPGGGDKRIESIK 746


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 189 IAINLFVCPFVVPSSRTSLND 127
           + +N+  CP  V +SRTS+ D
Sbjct: 150 VLVNVGFCPTFVRNSRTSIID 170


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 177 D*SRLELVLEFHCLIYVRARHDAGTRRQL 263
           D  RLEL  EFH   Y+  R  A   + L
Sbjct: 224 DQQRLELEKEFHYTRYITIRRKAELAQNL 252


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/58 (18%), Positives = 24/58 (41%)
 Frame = -2

Query: 359 PAFETYNKRNTAKDPKMQREPRAYRVLYQVVSQLSPCARIVSGPDINKAMKLQHELQS 186
           P F  Y   +      +     AY++ Y++  +L   +++     +NK   L   L++
Sbjct: 510 PYFTGYKGYSVQYAHNVDASRYAYKLAYEIADELQEISQVPKSNTLNKFTILARVLRT 567


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/58 (18%), Positives = 24/58 (41%)
 Frame = -2

Query: 359 PAFETYNKRNTAKDPKMQREPRAYRVLYQVVSQLSPCARIVSGPDINKAMKLQHELQS 186
           P F  Y   +      +     AY++ Y++  +L   +++     +NK   L   L++
Sbjct: 510 PYFTGYKGYSVQYAHNVDASRYAYKLAYEIADELQEISQVPKSNTLNKFTILARVLRT 567


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 51  RTKKQTPGRSDLYRFLHPPGL*LGMCHLDLFAKKALRTD 167
           + K+ TP +S  +  L    L     H D  A++A  TD
Sbjct: 264 KRKRYTPNKSAFWWTLEIEALRKECKHRDRLAQRAFHTD 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,404
Number of Sequences: 2352
Number of extensions: 9184
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)