Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_K03
(384 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64108-1|AAA36794.1| 843|Homo sapiens undulin 1 protein. 31 1.3
X06815-1|CAA29964.1| 216|Homo sapiens hU1-70K-like protein (216... 30 2.2
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 30 2.2
AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating B... 30 2.9
D86957-1|BAA13193.1| 508|Homo sapiens KIAA0202 protein. 29 5.1
AF440763-1|AAO13880.1| 453|Homo sapiens septin SEPT8_v3 protein. 29 5.1
AF440762-1|AAO13879.1| 562|Homo sapiens septin SEPT8_v2 protein. 29 5.1
AF440761-1|AAO13878.1| 508|Homo sapiens septin SEPT8_v1* protein. 29 5.1
AF179995-1|AAG09407.1| 508|Homo sapiens septin 2 protein. 29 5.1
AL590365-2|CAH73958.1| 137|Homo sapiens oleoyl-ACP hydrolase pr... 28 8.9
AK128261-1|BAC87358.1| 148|Homo sapiens protein ( Homo sapiens ... 28 8.9
>M64108-1|AAA36794.1| 843|Homo sapiens undulin 1 protein.
Length = 843
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 374 PDGVRPAFETYNKRNTAKDPKMQREPRAYRVLYQVVSQLSPCARIVSGPDIN 219
P +R + E YN+ DP + YR++Y+ VS P G DIN
Sbjct: 645 PQNLRVSEEWYNRLRITWDPPSS-PVKGYRIVYKPVSVPGPTLETFVGADIN 695
>X06815-1|CAA29964.1| 216|Homo sapiens hU1-70K-like protein (216
AA) protein.
Length = 216
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 GVSLPYLCQGQT-RCGHTATVGKLLDTVLDTREALFAFWDPLPYCAYYKSRMPDERHPAP 379
G+ P GQT G +GK+ + ALFA DP+PY + ++P E+H
Sbjct: 28 GLPQPPRASGQTPERGGATRLGKMTQFLPPNLLALFAPRDPIPYLPPLE-KLPHEKHHNQ 86
Query: 380 P 382
P
Sbjct: 87 P 87
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 GVSLPYLCQGQT-RCGHTATVGKLLDTVLDTREALFAFWDPLPYCAYYKSRMPDERHPAP 379
G+ P GQT G +GK+ + ALFA DP+PY + ++P E+H
Sbjct: 155 GLPQPPRASGQTPERGGATRLGKMTQFLPPNLLALFAPRDPIPYLPPLE-KLPHEKHHNQ 213
Query: 380 P 382
P
Sbjct: 214 P 214
>AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating
BIR-domain enzyme APOLLON protein.
Length = 4829
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 17 GDTARKGIVPQKDEEADAWAQRFVSFLAPARPMTGHVSFRLVREEGTTN 163
GD A+ + ++++W + + P M GHV F+ V TN
Sbjct: 1040 GDAAQHTRTWKLQTDSNSWDEHVFELVLPKACMVGHVDFKFVLNSNITN 1088
>D86957-1|BAA13193.1| 508|Homo sapiens KIAA0202 protein.
Length = 508
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 173 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 301
++L++ G S LC G+T G + + L +T +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153
>AF440763-1|AAO13880.1| 453|Homo sapiens septin SEPT8_v3 protein.
Length = 453
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 173 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 301
++L++ G S LC G+T G + + L +T +T EA
Sbjct: 56 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 98
>AF440762-1|AAO13879.1| 562|Homo sapiens septin SEPT8_v2 protein.
Length = 562
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 173 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 301
++L++ G S LC G+T G + + L +T +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153
>AF440761-1|AAO13878.1| 508|Homo sapiens septin SEPT8_v1* protein.
Length = 508
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 173 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 301
++L++ G S LC G+T G + + L +T +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153
>AF179995-1|AAG09407.1| 508|Homo sapiens septin 2 protein.
Length = 508
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 173 NRLIAIGARVGVSLPYLCQGQTRCGHTATVGKLLDTVLDTREA 301
++L++ G S LC G+T G + + L +T +T EA
Sbjct: 111 DQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFNTTFETEEA 153
>AL590365-2|CAH73958.1| 137|Homo sapiens oleoyl-ACP hydrolase
protein.
Length = 137
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 30 ERGLCPKRTKKQTPGRSDLYRFLHPPG 110
ERG PKRT++ TP + L FLHP G
Sbjct: 2 ERGDQPKRTRQATPCATRL--FLHPRG 26
>AK128261-1|BAC87358.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46397 fis, clone THYMU3003958. ).
Length = 148
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 215 PYLCQGQTRCGHTATVGKLLDTVLDTREALFAFWDPLPYC 334
P L T CGHT + L LF W PLP C
Sbjct: 9 PCLSWSHTGCGHTTSWSSLSG---QPHNPLFPSWAPLPSC 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,603,525
Number of Sequences: 237096
Number of extensions: 1330271
Number of successful extensions: 3389
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3389
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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